Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(630)		   Tiling Array
(81)		   cDNA Array
(676)		   Oligo Array
(1,413)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(5)		   HT-Seq
(104)		   Other
(11)		   All
(2,920)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Photoinduction of the Vibrio campbellii Type III Secretion System (GSE35702) [GeneChip] [Vharveyis520694F] US Naval Research Laboratory V campbellii BAA-1116 whole genome microarray (GPL10230) US Naval Research Laboratory 2012-02-10 Vibrio harveyi ATCC BAA-1116
Vibrio harveyi ATCC BAA-1116		 127,170
(12,717 x 10) 		10 by_platform
by_series
2 Vibrio campbellii bioluminescence and its effect on gene expression and virulence (GSE34741) [GeneChip] [Vharveyis520694F] US Naval Research Laboratory V campbellii BAA-1116 whole genome microarray (GPL10230) US Naval Research Laboratory 2011-12-27 Vibrio campbellii
Vibrio campbellii		 76,302
(12,717 x 6) 		6 by_platform
by_series
3 Expression profiling data from mid-log phase cultures of wild type Vibrio campbellii BAA-1116 (GSE20960) [GeneChip] [Vharveyis520694F] US Naval Research Laboratory V campbellii BAA-1116 whole genome microarray (GPL10230) US Naval Research Laboratory 2010-03-19 Vibrio harveyi ATCC BAA-1116
Vibrio harveyi ATCC BAA-1116		 63,585
(12,717 x 5) 		5 by_platform
by_series
4 4 growth modes - RNA from Laramie & Houston RNA (GSE532) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wyoming 2003-07-14 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 144,585
(5,355 x 27) 		27 by_platform
by_series
5 Transcriptome dynamics during the transition from anaerobic photosynthesis to aerobic respiration in R. sphaeroides (GSE12269) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) The University of Texas 2008-07-28 Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1		 128,520
(5,355 x 24) 		24 by_platform
by_series
6 Expression data from H2-producing Rhodobacter sphaeroides cultures fed different organic substrates (GSE29811) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wisconsin-Madison 2011-06-08 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 96,390
(5,355 x 18) 		18 by_platform
by_series
7 PpsR regulon in Rhodobacter sphaeroides (GSE1515) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wyoming 2004-06-29 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 80,325
(5,355 x 15) 		15 by_platform
by_series
8 Regulation of hydrogen peroxide-dependent gene expression in Rhodobacter sphaeroides: Regulatory functions of OxyR (GSE2829) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wyoming 2005-06-20 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 80,325
(5,355 x 15) 		15 by_platform
by_series
9 RpoHI and RpoHII regulons in Rhodobacter sphaeroides 2.4.1 from gene expression profiling (GSE39712) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wisconsin - Madison 2012-07-29 Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1		 80,325
(5,355 x 15) 		15 by_platform
by_series
10 RpoHI and RpoHII regulons in Rhodobacter sphaeroides 2.4.1 (GSE39806) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wisconsin - Madison 2012-08-01 Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1		 80,325
(5,355 x 15) 		15 by_platform
by_series
11 Rhodobacter sphaeroides salt stress response (GSE8082) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wyoming 2007-06-11 Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1		 80,325
(5,355 x 15) 		15 by_platform
by_series
12 Oxygen-dependent transcriptome profiling in R.sphaeroides 2.4.1 in the dark (GSE7004) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wyoming 2007-02-10 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 74,970
(5,355 x 14) 		14 by_platform
by_series
13 Rhodobacter sphaeroides respiration and photosynthesis (GSE2150) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wisconsin - Madison 2005-01-12 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 64,260
(5,355 x 12) 		12 by_platform
by_series
14 Transcriptome response to nitrosative stress in Rhodobacter sphaeroides 2.4.1 (GSE33641) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) The University of Tokyo 2011-11-12 Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1		 64,260
(5,355 x 12) 		12 by_platform
by_series
15 Responses of the Rhodobacter sphaeroides Transcriptome to Blue Light (GSE1480) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wyoming 2004-06-15 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 48,195
(5,355 x 9) 		9 by_platform
by_series
16 Transcriptional responses of Rhaodobacter sphaeroides to Tungsten (GSE22063) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wyoming 2010-05-31 Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1		 42,840
(5,355 x 8) 		1 7 by_platform
by_series
17 30% O2 vs PS 10W/m2 (GSE2145) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wisconsin - Madison 2005-01-11 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 37,485
(5,355 x 7) 		7 by_platform
by_series
18 Effect of varying illumination (GSE139) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Texas Health Science Center at Houston 2002-12-31 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 32,130
(5,355 x 6) 		6 by_platform
by_series
19 Role of the global transcriptional regulator PrrA in R. sphaeroides 2.4.1 (GSE20337) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) The University of Texas 2010-02-16 Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1		 32,130
(5,355 x 6) 		6 by_platform
by_series
20 CT01 vs wild-type at 3% O2 (GSE2146) [GeneChip] [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip (GPL162) University of Wisconsin - Madison 2005-01-11 Rhodobacter sphaeroides
Rhodobacter sphaeroides		 26,775
(5,355 x 5) 		5 by_platform
by_series
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