Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8,349)
  Tiling Array
(1,464)
  cDNA Array
(10,807)
  Oligo Array
(21,920)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(2,336)
  Other
(164)
  All
(45,091)
 
  brain
(3)
  blood
(129)
  connective
(21)
  reproductive
(49)
  muscular
(0)
  digestive
(367)
  liver
(0)
  lung
(46)
  urinary
(10)
  endo/exo-crine
(123)
  embryo
(18)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(23)
  unclassified
(7,560)
  all
(8,349)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM157453 zipA__U_N0075_r3 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:zipA__U_N0075_r3 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
2 GSM157452 zipA__U_N0075_r2 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:zipA__U_N0075_r2 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
3 GSM157451 zipA__U_N0075_r1 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:zipA__U_N0075_r1 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
4 GSM157550 yoeB__U_N0075_r3 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:yoeB__U_N0075_r3 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
5 GSM157549 yoeB__U_N0075_r2 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:yoeB__U_N0075_r2 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
6 GSM157548 yoeB__U_N0075_r1 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:yoeB__U_N0075_r1 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
7 GSM92169 YL117 od 3.5 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL117 planktonic culture title:YL117 od 3.5 description:RNA extracted from culture at optical density at 600 nm of 3.5
8 GSM92170 YL117 od 2.0 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL117 planktonic culture title:YL117 od 2.0 description:RNA extracted from culture at optical density at 600 nm of 2.0
9 GSM92171 YL117 od 1.4 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL117 planktonic culture title:YL117 od 1.4 description:RNA extracted from culture at optical density at 600 nm of 1.4
10 GSM92172 YL117 od 0.8 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL117 planktonic culture title:YL117 od 0.8 description:RNA extracted from culture at optical density at 600 nm of 0.8
11 GSM92173 YL117 od 0.5 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL117 planktonic culture title:YL117 od 0.5 description:RNA extracted from culture at optical density at 600 nm of 0.5
12 GSM92164 YL113 od 3.5 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL113 planktonic culture title:YL113 od 3.5 description:RNA extracted from culture at optical density at 600 nm of 3.5
13 GSM92165 YL113 od 2.0 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL113 planktonic culture title:YL113 od 2.0 description:RNA extracted from culture at optical density at 600 nm of 2.0
14 GSM92166 YL113 od 1.4 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL113 plamktonic culture title:YL113 od 1.4 description:RNA extracted from culture at optical density at 600 nm of 1.4
15 GSM92167 YL113 od 0.8 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL113 planktonic culture title:YL113 od 0.8 description:RNA extracted from culture at optical density at 600 nm of 0.8
16 GSM92168 YL113 od 0.5 5,900 University of Washington 2006-01-12 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:YL113 planktonic culture title:YL113 od 0.5 description:RNA extracted from culture at optical density at 600 nm of 0.5
17 GSM157447 yebF__U_N0075_r3 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:yebF__U_N0075_r3 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
18 GSM157446 yebF__U_N0075_r2 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:yebF__U_N0075_r2 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
19 GSM157445 yebF__U_N0075_r1 7,312 Boston University 2007-01-22 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:Escherichia coli title:yebF__U_N0075_r1 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
20 GSM543904 YA105, biological rep3 7,312 Ajinomoto 2010-05-17 [GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199) RNA Escherichia coli
Escherichia coli
unclassified source_name:YA105 title:YA105, biological rep3 description:YA105_3
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