Gene Expression Omnibus (GEO) Overview Version:2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(516,316)
  Primates
(5,042)
  Rodents
(188,439)
  Mammals
(16,727)
  Vertebrates
(18,617)
  Invertebrates
(38,231)
  Plants
(93,098)
  Bacteria
(39,426)
  Viruses
(1,263)
  Phages
(101)
  Unclassified
(5,385)
  All
(924,376)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(7,463)
  Tiling Array
(684)
  cDNA Array
(10,536)
  Oligo Array
(19,784)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(851)
  Other
(57)
  All
(39,426)
 
  brain
(3)
  blood
(111)
  connective
(18)
  reproductive
(43)
  muscular
(0)
  digestive
(196)
  liver
(0)
  lung
(40)
  urinary
(10)
  endo/exo-crine
(123)
  embryo
(18)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(23)
  unclassified
(6,878)
  all
(7,463)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM499302 Group A Streptococcus grown in THY, ML phase replicate 1 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
2 GSM499303 Group A Streptococcus grown in THY, ML phase replicate 2 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
3 GSM499304 Group A Streptococcus grown in THY, ML phase replicate 3 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
4 GSM499305 Group A Streptococcus grown in THY, LL phase replicate 1 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
5 GSM499306 Group A Streptococcus grown in THY, LL phase replicate 2 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
6 GSM499313 Group A Streptococcus grown in THY, LL phase replicate 3 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
7 GSM499314 Group A Streptococcus grown in THY, S phase replicate 1 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
8 GSM499315 Group A Streptococcus grown in THY, S phase replicate 2 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
9 GSM499360 Group A Streptococcus grown in THY, S phase replicate 3 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Part of the study on the adaptation of group A Streptococcus to human amniotic fluid
10 GSM499361 Group A Streptococcus grown in human amniotic fluid, mid log phase, replicate 1 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, mid log phase, replicate 1
11 GSM499362 Group A Streptococcus grown in human amniotic fluid, mid log phase, replicate 2 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, mid log phase, replicate 2
12 GSM499363 Group A Streptococcus grown in human amniotic fluid, mid log phase, replicate 3 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, mid log phase, replicate 3
13 GSM499364 Group A Streptococcus grown in human amniotic fluid, late log phase, replicate 1 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, late log phase, replicate 1
14 GSM499365 Group A Streptococcus grown in human amniotic fluid, late log phase, replicate 2 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, late log phase, replicate 2
15 GSM499367 Group A Streptococcus grown in human amniotic fluid, late log phase, replicate 3 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, late log phase, replicate 3
16 GSM499369 Group A Streptococcus grown in human amniotic fluid, stationary phase, replicate 1 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, stationary phase, replicate 1
17 GSM499391 Group A Streptococcus grown in human amniotic fluid, stationary phase, replicate 2 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, stationary phase, replicate 2
18 GSM499399 Group A Streptococcus grown in human amniotic fluid, stationary phase, replicate 3 1,765 National Medicines Institute 2010-01-21 [GeneChip] TMHRI M28 GAS array (GPL9953) RNA Streptococcus pyogenes MGAS6180
Streptococcus pyogenes MGAS6180
placenta Group A Streptococcus grown in human amniotic fluid, stationary phase, replicate 3
19 GSM361236 mid log phase_1 2,136 National Medicines Institute 2009-01-16 [GeneChip] TMHRI Streptococcus agalactiae 2K array version1 (GPL6923) RNA Streptococcus agalactiae
Streptococcus agalactiae
placenta Part of series of experiments performed to determine response of S. agalactiae to human amniotic fluid
20 GSM361237 mid log phase_2 2,136 National Medicines Institute 2009-01-16 [GeneChip] TMHRI Streptococcus agalactiae 2K array version1 (GPL6923) RNA Streptococcus agalactiae
Streptococcus agalactiae
placenta Part of series of experiments performed to determine response of S. agalactiae to human amniotic fluid
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