Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8,349)
  Tiling Array
(1,464)
  cDNA Array
(10,807)
  Oligo Array
(21,920)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(2,336)
  Other
(164)
  All
(45,091)
 
  brain
(3)
  blood
(129)
  connective
(21)
  reproductive
(49)
  muscular
(0)
  digestive
(367)
  liver
(0)
  lung
(46)
  urinary
(10)
  endo/exo-crine
(123)
  embryo
(18)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(23)
  unclassified
(7,560)
  all
(8,349)
 
1   |   2   |   3   |   4   |   5      »      [378]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1001128 Mid-exponential 17978, biological rep 1 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential 17978 title:Mid-exponential 17978, biological rep 1 description:Gene expression data from mid-exponential phase wildtype ATCC 17978 cells
2 GSM1001129 Mid-exponential 17978, biological rep 2 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential 17978 title:Mid-exponential 17978, biological rep 2 description:Gene expression data from mid-exponential phase wildtype ATCC 17978 cells
3 GSM1001130 Mid-exponential 17978, biological rep 3 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential 17978 title:Mid-exponential 17978, biological rep 3 description:Gene expression data from mid-exponential phase wildtype ATCC 17978 cells
4 GSM1001131 Mid-exponential lpsB:Tn5, biological rep 1 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential lpsB:Tn5 title:Mid-exponential lpsB:Tn5, biological rep 1 description:Gene expression data from mid-exponential ATCC 17978 cells containing lpsB:Tn5 mutation
5 GSM1001132 Mid-exponential lpsB:Tn5, biological rep 2 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential lpsB:Tn5 title:Mid-exponential lpsB:Tn5, biological rep 2 description:Gene expression data from mid-exponential ATCC 17978 cells containing lpsB:Tn5 mutation
6 GSM1001133 Mid-exponential ∆lpsB, biological rep 1 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential ∆lpsB title:Mid-exponential ∆lpsB, biological rep 1 description:Gene expression data from mid-exponential ATCC 17978 cells containing ∆lpsB mutation
7 GSM1001134 Mid-exponential ∆lpsB, biological rep 2 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential ∆lpsB title:Mid-exponential ∆lpsB, biological rep 2 description:Gene expression data from mid-exponential ATCC 17978 cells containing ∆lpsB mutation
8 GSM1001135 Mid-exponential ∆lpsB, biological rep 3 7,727 University of Rochester 2012-09-11 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Mid-exponential ∆lpsB title:Mid-exponential ∆lpsB, biological rep 3 description:Gene expression data from mid-exponential ATCC 17978 cells containing ∆lpsB mutation
9 GSM1257064 Wild type Exponential, biological rep 1 7,727 University of Rochester 2013-11-01 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Acinetobacter baumannii mid-exponential title:Wild type Exponential, biological rep 1 description:Gene expression data from mid-exponential phase wildtype 98-37-09 cells
10 GSM1257065 Wild type Exponential, biological rep 2 7,727 University of Rochester 2013-11-01 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Acinetobacter baumannii mid-exponential title:Wild type Exponential, biological rep 2 description:Gene expression data from mid-exponential phase wildtype 98-37-09 cells
11 GSM1257066 RNase T2-mutant Exponential, biological rep 1 7,727 University of Rochester 2013-11-01 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Acinetobacter baumannii mid-exponential title:RNase T2-mutant Exponential, biological rep 1 description:Gene expression data from mid-exponential phase ACJ7 (A1S_3026 mutation) cells
12 GSM1257067 RNase T2-mutant Exponential, biological rep 2 7,727 University of Rochester 2013-11-01 [GeneChip] Affymetrix Acinetobacter baumannii GeneChip [PMDacba1a520551F] (GPL16041) RNA Acinetobacter baumannii
Acinetobacter baumannii
unclassified source_name:Acinetobacter baumannii mid-exponential title:RNase T2-mutant Exponential, biological rep 2 description:Gene expression data from mid-exponential phase ACJ7 (A1S_3026 mutation) cells
13 GSM181342 Vibrio fischeri cells grown to an OD600 of 0.3 with no exogenous 3OC6-HSL added #1 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 0.3 with no exogenous 3OC6-HSL added #1 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
14 GSM181344 Vibrio fischeri cells grown to an OD600 of 0.3 with no exogenous 3OC6-HSL added #2 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 0.3 with no exogenous 3OC6-HSL added #2 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
15 GSM181346 Vibrio fischeri cells grown to an OD600 of 0.3 with exogenous 3OC6-HSL added #1 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 0.3 with exogenous 3OC6-HSL added #1 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
16 GSM181348 Vibrio fischeri cells grown to an OD600 of 0.3 with exogenous 3OC6-HSL added #2 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 0.3 with exogenous 3OC6-HSL added #2 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
17 GSM181349 Vibrio fischeri cells grown to an OD600 of 1.5 with no exogenous 3OC6-HSL added #1 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 1.5 with no exogenous 3OC6-HSL added #1 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
18 GSM181351 Vibrio fischeri cells grown to an OD600 of 1.5 with no exogenous 3OC6-HSL added #2 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 1.5 with no exogenous 3OC6-HSL added #2 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
19 GSM181353 Vibrio fischeri cells grown to an OD600 of 1.5 with exogenous 3OC6-HSL added #1 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 1.5 with exogenous 3OC6-HSL added #1 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
20 GSM181355 Vibrio fischeri cells grown to an OD600 of 1.5 with exogenous 3OC6-HSL added #2 4,049 The University of British Columbia 2007-04-09 [GeneChip] Custom Vibrio fischeri GeneChip Array (Affymetrix) (GPL5074) RNA Aliivibrio fischeri
Aliivibrio fischeri
unclassified source_name:Symbiotic bacterium Vibrio fischeri title:Vibrio fischeri cells grown to an OD600 of 1.5 with exogenous 3OC6-HSL added #2 description:A high-density oligonucleotide microarray (Affymetrix GeneChip) was custom designed and manufactured by Affymetrix based on the sequences of ORFs and intergenic regions. cDNA synthesis, fragmentation, labeling, hybridization, and processing of custom designed Vibrio fischeri GeneChips were carried out as recommended by the manufacturer. Experiments were performed in duplicate with independently prepared samples.
1   |   2   |   3   |   4   |   5      »      [378]