Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Bacteria
(39,082)

Viruses
(1,266)

Phages
(101)

Unclassified
(5,242)

All
(898,944)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(7,355)

Tiling Array
(676)

cDNA Array
(10,532)

Oligo Array
(19,682)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

muscular
(0)

liver
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(23)

unclassified
(6,777)

all
(7,355)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM157453	zipA__U_N0075_r3	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:zipA__U_N0075_r3 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
2	GSM157452	zipA__U_N0075_r2	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:zipA__U_N0075_r2 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
3	GSM157451	zipA__U_N0075_r1	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:zipA__U_N0075_r1 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
4	GSM157550	yoeB__U_N0075_r3	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:yoeB__U_N0075_r3 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
5	GSM157549	yoeB__U_N0075_r2	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:yoeB__U_N0075_r2 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
6	GSM157548	yoeB__U_N0075_r1	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:yoeB__U_N0075_r1 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
7	GSM92169	YL117 od 3.5	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL117 planktonic culture title:YL117 od 3.5 description:RNA extracted from culture at optical density at 600 nm of 3.5
8	GSM92170	YL117 od 2.0	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL117 planktonic culture title:YL117 od 2.0 description:RNA extracted from culture at optical density at 600 nm of 2.0
9	GSM92171	YL117 od 1.4	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL117 planktonic culture title:YL117 od 1.4 description:RNA extracted from culture at optical density at 600 nm of 1.4
10	GSM92172	YL117 od 0.8	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL117 planktonic culture title:YL117 od 0.8 description:RNA extracted from culture at optical density at 600 nm of 0.8
11	GSM92173	YL117 od 0.5	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL117 planktonic culture title:YL117 od 0.5 description:RNA extracted from culture at optical density at 600 nm of 0.5
12	GSM92164	YL113 od 3.5	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL113 planktonic culture title:YL113 od 3.5 description:RNA extracted from culture at optical density at 600 nm of 3.5
13	GSM92165	YL113 od 2.0	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL113 planktonic culture title:YL113 od 2.0 description:RNA extracted from culture at optical density at 600 nm of 2.0
14	GSM92166	YL113 od 1.4	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL113 plamktonic culture title:YL113 od 1.4 description:RNA extracted from culture at optical density at 600 nm of 1.4
15	GSM92167	YL113 od 0.8	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL113 planktonic culture title:YL113 od 0.8 description:RNA extracted from culture at optical density at 600 nm of 0.8
16	GSM92168	YL113 od 0.5	5,900	University of Washington	2006-01-12	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:YL113 planktonic culture title:YL113 od 0.5 description:RNA extracted from culture at optical density at 600 nm of 0.5
17	GSM157447	yebF__U_N0075_r3	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:yebF__U_N0075_r3 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
18	GSM157446	yebF__U_N0075_r2	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:yebF__U_N0075_r2 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
19	GSM157445	yebF__U_N0075_r1	7,312	Boston University	2007-01-22	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:Escherichia coli title:yebF__U_N0075_r1 description:GeneChips were washed and stained with an FS450 fluidics machine and scanned using a GeneChip Scanner 3000
20	GSM543904	YA105, biological rep3	7,312	Ajinomoto	2010-05-17	[GeneChip] [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array (GPL199)	RNA	Escherichia coli	unclassified	source_name:YA105 title:YA105, biological rep3 description:YA105_3

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