Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8,349)
  Tiling Array
(1,464)
  cDNA Array
(10,807)
  Oligo Array
(21,920)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(2,336)
  Other
(164)
  All
(45,091)
 
  brain
(19)
  blood
(19)
  connective
(12)
  reproductive
(2)
  muscular
(0)
  digestive
(661)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(4)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(109)
  unclassified
(1,510)
  all
(2,336)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1016707 PCC6803_PsrR1+_0h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_PsrR1+_0h_copper depletion_1 title:PCC6803_PsrR1+_0h_copper depletion_1
2 GSM1016708 PCC6803_PsrR1+_0h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_PsrR1+_0h_copper depletion_2 title:PCC6803_PsrR1+_0h_copper depletion_2
3 GSM1016709 PCC6803_PsrR1+_24h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_PsrR1+_24h_copper depletion_1 title:PCC6803_PsrR1+_24h_copper depletion_1
4 GSM1016710 PCC6803_PsrR1+_24h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_PsrR1+_24h_copper depletion_2 title:PCC6803_PsrR1+_24h_copper depletion_2
5 GSM1016711 PCC6803_PsrR1+_24h_copper depletion_3 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_PsrR1+_24h_copper depletion_3 title:PCC6803_PsrR1+_24h_copper depletion_3
6 GSM1016712 PCC6803_Wt+empty_plasmid_0h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_Wt+empty_plasmid_0h_copper depletion_1 title:PCC6803_Wt+empty_plasmid_0h_copper depletion_1
7 GSM1016713 PCC6803_Wt+empty_plasmid_0h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_Wt+empty_plasmid_0h_copper depletion_2 title:PCC6803_Wt+empty_plasmid_0h_copper depletion_2
8 GSM1016714 PCC6803_Wt+empty_plasmid_24h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_Wt+empty_plasmid_24h_copper depletion_1 title:PCC6803_Wt+empty_plasmid_24h_copper depletion_1
9 GSM1016715 PCC6803_Wt+empty_plasmid_24h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_Wt+empty_plasmid_24h_copper depletion_2 title:PCC6803_Wt+empty_plasmid_24h_copper depletion_2
10 GSM1016716 PCC6803_Wt+empty_plasmid_24h_copper depletion_3 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:PCC6803_Wt+empty_plasmid_24h_copper depletion_3 title:PCC6803_Wt+empty_plasmid_24h_copper depletion_3
11 GSM1111628 PCC6803_WT_CT11.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes before light is switched off title:PCC6803_WT_CT11.5_rep1
12 GSM1111629 PCC6803_WT_CT12.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes after light is switched off title:PCC6803_WT_CT12.5_rep1
13 GSM1111630 PCC6803_WT_CT17.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes before midnight title:PCC6803_WT_CT17.5_rep1
14 GSM1111631 PCC6803_WT_CT23.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes before light onset title:PCC6803_WT_CT23.5_rep1
15 GSM1111632 PCC6803_WT_CT0.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes after light onset title:PCC6803_WT_CT0.5_rep1
16 GSM1111633 PCC6803_WT_CT5.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes before noon title:PCC6803_WT_CT5.5_rep1
17 GSM1111634 PCC6803_WT_CT11.5_rep2 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes before light is switched off title:PCC6803_WT_CT11.5_rep2
18 GSM1111635 PCC6803_WT_CT12.5_rep2 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes after light is switched off title:PCC6803_WT_CT12.5_rep2
19 GSM1111636 PCC6803_WT_CT17.5_rep2 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes before midnight title:PCC6803_WT_CT17.5_rep2
20 GSM1111637 PCC6803_WT_CT23.5_rep2 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803
unclassified source_name:30 minutes before light onset title:PCC6803_WT_CT23.5_rep2
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