Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8,349)
  Tiling Array
(1,464)
  cDNA Array
(10,807)
  Oligo Array
(21,920)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(2,336)
  Other
(164)
  All
(45,091)
 
  brain
(19)
  blood
(19)
  connective
(12)
  reproductive
(2)
  muscular
(0)
  digestive
(661)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(4)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(109)
  unclassified
(1,510)
  all
(2,336)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM613995 EB-: total RNA (ACGTGC) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Elementary Bodies title:EB-: total RNA (ACGTGC) description:total RNA
2 GSM613996 EB-: total RNA (GTAT) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Elementary Bodies title:EB-: total RNA (GTAT) description:total RNA
3 GSM613997 EB+: RNA enriched for native 5' (GTGA) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Elementary Bodies title:EB+: RNA enriched for native 5' (GTGA) description:enriched RNA
4 GSM613998 EB+: RNA enriched for native 5' (AGCGTA) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Elementary Bodies title:EB+: RNA enriched for native 5' (AGCGTA) description:enriched RNA
5 GSM613999 RB-: total RNA (GTTC) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Reticulate Bodies title:RB-: total RNA (GTTC) description:total RNA
6 GSM614000 RB-: total RNA (AGTCAG) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Reticulate Bodies title:RB-: total RNA (AGTCAG) description:total RNA
7 GSM614001 RB+: RNA enriched for native 5' (TCAT) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Reticulate Bodies title:RB+: RNA enriched for native 5' (TCAT) description:enriched RNA
8 GSM614002 RB+: RNA enriched for native 5' (ATACTG) 0 University of Würzburg 2010-10-28 [HT Sequencing] 454 GS (Chlamydophila pneumoniae CWL029) (GPL11140) SRA Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae CWL029
unclassified source_name:Reticulate Bodies title:RB+: RNA enriched for native 5' (ATACTG) description:enriched RNA
9 GSM889304 DSH_PAO1_exp1 0 Università degli Studi di Milano 2012-03-07 [HT Sequencing] 454 GS FLX Titanium (Pseudomonas aeruginosa) (GPL15322) SRA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:Pseudomonas aeruginoasa PAO1 cDNA title:DSH_PAO1_exp1 description:small RNA profiling
10 GSM889305 DSH_PAO1_exp2 0 Università degli Studi di Milano 2012-03-07 [HT Sequencing] 454 GS FLX Titanium (Pseudomonas aeruginosa) (GPL15322) SRA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:Pseudomonas aeruginoasa PAO1 cDNA title:DSH_PAO1_exp2 description:small RNA profiling
11 GSM889306 DSH_PA14_exp1 0 Università degli Studi di Milano 2012-03-07 [HT Sequencing] 454 GS FLX Titanium (Pseudomonas aeruginosa) (GPL15322) SRA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:Pseudomonas aeruginoasa PA14 cDNA title:DSH_PA14_exp1 description:small RNA profiling
12 GSM889307 DSH_PA14_exp2 0 Università degli Studi di Milano 2012-03-07 [HT Sequencing] 454 GS FLX Titanium (Pseudomonas aeruginosa) (GPL15322) SRA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:Pseudomonas aeruginoasa PA14 cDNA title:DSH_PA14_exp2 description:small RNA profiling
13 GSM1029387 RGL2 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL2
14 GSM1029388 RGL4 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL4 description:MFA wig file generated by taking the ratio between sample RGL2 and RGL4 processed data file: MG1655_MFA.wig
15 GSM1029389 RGL6 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL6 description:MFA wig file generated by taking the ratio between sample RGL6 and RGL4 processed data file: RCe268_MFA.wig
16 GSM1029390 RGL10 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL10 description:MFA wig file generated by taking the ratio between sample RGL10 and RGL4 processed data file: N6576_MFA.wig
17 GSM1029391 RGL12 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL12 description:MFA wig file generated by taking the ratio between sample RGL12 and RGL4 processed data file: RCe261_MFA.wig
18 GSM1029392 RGL16 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL16 description:MFA wig file generated by taking the ratio between sample RGL16 and RGL29 processed data file: N8226_MFA.wig
19 GSM1029393 RGL18 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL18 description:MFA wig file generated by taking the ratio between sample RGL18 and RGL29 processed data file: N8227_MFA.wig
20 GSM1029394 RGL19 0 University of Nottingham 2012-11-01 [HT Sequencing] AB 5500 Genetic Analyzer (Escherichia coli) (GPL16232) SRA Escherichia coli
Escherichia coli
unclassified source_name:Genomic DNA title:RGL19 description:MFA wig file generated by taking the ratio between sample RGL19 and RGL29 processed data file: N8227_stat_MFA.wig
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