Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(7,463)		   Tiling Array
(684)		   cDNA Array
(10,536)		   Oligo Array
(19,945)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(51)		   HT-Seq
(877)		   Other
(57)		   All
(39,613)		  
  brain
(19)		   blood
(16)		   connective
(11)		   reproductive
(2)		   muscular
(0)		   digestive
(50)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(4)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(90)		   unclassified
(685)		   all
(877)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM986115 Vbr 0 Pacific Biosciences 2012-08-15 [HT Sequencing] PacBio RS (Vibrio breoganii) (GPL15937) SRA Vibrio breoganii
Vibrio breoganii		 unclassified source_name:Bacterial gDNA title:Vbr description:Sample 3
2 GSM847475 Short_untreated 0 Rockefeller University 2011-12-09 [HT Sequencing] Illumina Genome Analyzer IIx (Thermus thermophilus) (GPL14992) SRA Thermus thermophilus
Thermus thermophilus		 unclassified source_name:Thermus thermophilus HB8 title:Short_untreated description:Endogenous RNA
3 GSM847476 Short_treated 0 Rockefeller University 2011-12-09 [HT Sequencing] Illumina Genome Analyzer IIx (Thermus thermophilus) (GPL14992) SRA Thermus thermophilus
Thermus thermophilus		 unclassified source_name:Thermus thermophilus HB8 title:Short_treated description:Endogenous RNA
4 GSM847477 Medium_untreated 0 Rockefeller University 2011-12-09 [HT Sequencing] Illumina HiSeq 2000 (Thermus thermophilus) (GPL14993) SRA Thermus thermophilus
Thermus thermophilus		 unclassified source_name:Thermus thermophilus HB8 title:Medium_untreated description:Endogenous RNA
5 GSM847478 Medium_treated 0 Rockefeller University 2011-12-09 [HT Sequencing] Illumina HiSeq 2000 (Thermus thermophilus) (GPL14993) SRA Thermus thermophilus
Thermus thermophilus		 unclassified source_name:Thermus thermophilus HB8 title:Medium_treated description:Endogenous RNA
6 GSM847479 Long_untreated 0 Rockefeller University 2011-12-09 [HT Sequencing] Illumina HiSeq 2000 (Thermus thermophilus) (GPL14993) SRA Thermus thermophilus
Thermus thermophilus		 unclassified source_name:Thermus thermophilus HB8 title:Long_untreated description:Endogenous RNA
7 GSM847480 Long_treated 0 Rockefeller University 2011-12-09 [HT Sequencing] Illumina HiSeq 2000 (Thermus thermophilus) (GPL14993) SRA Thermus thermophilus
Thermus thermophilus		 unclassified source_name:Thermus thermophilus HB8 title:Long_treated description:Endogenous RNA
8 GSM1016707 PCC6803_PsrR1+_0h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_PsrR1+_0h_copper depletion_1 title:PCC6803_PsrR1+_0h_copper depletion_1
9 GSM1016708 PCC6803_PsrR1+_0h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_PsrR1+_0h_copper depletion_2 title:PCC6803_PsrR1+_0h_copper depletion_2
10 GSM1016709 PCC6803_PsrR1+_24h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_PsrR1+_24h_copper depletion_1 title:PCC6803_PsrR1+_24h_copper depletion_1
11 GSM1016710 PCC6803_PsrR1+_24h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_PsrR1+_24h_copper depletion_2 title:PCC6803_PsrR1+_24h_copper depletion_2
12 GSM1016711 PCC6803_PsrR1+_24h_copper depletion_3 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_PsrR1+_24h_copper depletion_3 title:PCC6803_PsrR1+_24h_copper depletion_3
13 GSM1016712 PCC6803_Wt+empty_plasmid_0h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_Wt+empty_plasmid_0h_copper depletion_1 title:PCC6803_Wt+empty_plasmid_0h_copper depletion_1
14 GSM1016713 PCC6803_Wt+empty_plasmid_0h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_Wt+empty_plasmid_0h_copper depletion_2 title:PCC6803_Wt+empty_plasmid_0h_copper depletion_2
15 GSM1016714 PCC6803_Wt+empty_plasmid_24h_copper depletion_1 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_Wt+empty_plasmid_24h_copper depletion_1 title:PCC6803_Wt+empty_plasmid_24h_copper depletion_1
16 GSM1016715 PCC6803_Wt+empty_plasmid_24h_copper depletion_2 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_Wt+empty_plasmid_24h_copper depletion_2 title:PCC6803_Wt+empty_plasmid_24h_copper depletion_2
17 GSM1016716 PCC6803_Wt+empty_plasmid_24h_copper depletion_3 42,303 University of Freiburg 2012-10-09 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:PCC6803_Wt+empty_plasmid_24h_copper depletion_3 title:PCC6803_Wt+empty_plasmid_24h_copper depletion_3
18 GSM1111628 PCC6803_WT_CT11.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:30 minutes before light is switched off title:PCC6803_WT_CT11.5_rep1
19 GSM1111629 PCC6803_WT_CT12.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:30 minutes after light is switched off title:PCC6803_WT_CT12.5_rep1
20 GSM1111630 PCC6803_WT_CT17.5_rep1 42,303 Humboldt University Berlin 2013-04-01 [HT Sequencing] Agilent-027432 Syn6803_expressions454_4-3probes (GPL15867) RNA Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 unclassified source_name:30 minutes before midnight title:PCC6803_WT_CT17.5_rep1
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