| 1 |
Genomic Acquisition of Virulence Factors in Natural Isolates of Burkholderia (GSE18766) |
[Oligo Array] 081118_Sims_GIS_multi_Burkh_cgh (GPL9490) |
GENOME INSTITUTE OF SINGAPORE |
2009-10-27 |
Burkholderia thailandensis
 |
17,937,136
(366,064 x 49)
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49 |
by_platform
by_series |
| 2 |
Comparative genomic hybridization study of Streptococcus pneumoniae (GSE29501) |
[Oligo Array] Agilent-031422 S_pneumoniae_CGH (GPL13281) |
J Craig Venter Institute |
2011-05-24 |
Streptococcus pneumoniae,Streptococcus pneumoniae TIGR4
 |
11,531,100
(45,220 x 255)
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255 |
by_platform
by_series |
| 3 |
Comparative genomic hybridization study of Neisseria meningitidis (GSE30813) |
[Oligo Array] Agilent-032741 Neisseria_CGH (GPL13375) |
J Craig Venter Institute |
2011-07-20 |
Neisseria meningitidis
 |
11,305,000
(45,220 x 250)
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250 |
by_platform
by_series |
| 4 |
Novel gene discovery in up to 10 ETEC strains and production of species microarray. Discovery of conserved and unique ETEC genes by comparative genome hybridization studies. (GSE25601) |
[Oligo Array] Agilent-029784 ETEC_CGH (GPL10979) |
J Craig Venter Institute |
2010-11-24 |
Escherichia coli
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9,767,520
(45,220 x 216)
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216 |
by_platform
by_series |
| 5 |
Mutation Mapping of 31 Streptococcus suis strains (GSE26052) |
[Oligo Array] ICDC Streptococcus suis GZ1 tilling arrays (MAP01, MAP02) (GPL11315) |
China CDC |
2010-12-14 |
Streptococcus suis
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9,023,852
(291,092 x 31)
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31 |
by_platform
by_series |
| 6 |
Comparative Genomics Study of Clostridium botulinum (GSE19107) |
[Oligo Array] Agilent-022589 Clostridium_botulinum_species_cgh_array 022588 (GPL9104) |
J Craig Venter Institute |
2009-11-19 |
Clostridium botulinum
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7,054,320
(45,220 x 156)
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2 |
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154 |
by_platform
by_series |
| 7 |
Identification of new genomic areas within the genomes of Yersinia pestis and Yersinia pseudotuberculosis strains through targeted genome sequencing (GSE23797) |
[Oligo Array] Agilent-024504 Yersinia_CGH_20090707 (GPL10805) |
J Craig Venter Institute |
2010-08-25 |
Yersinia pestis
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7,054,320
(45,220 x 156)
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156 |
by_platform
by_series |
| 8 |
Cell envelope metabolism in phosphate limited Bacillus subtilis cells (GSE23164) |
[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486) |
Trinity College Dublin |
2010-07-26 |
Bacillus subtilis
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6,896,682
(383,149 x 18)
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18 |
by_platform
by_series |
| 9 |
Expression analysis of Shigella flexneri 2a strain 301 (GSE22800) |
[Oligo Array] Sf301_Nimblegen_380k array (GPL10653) |
Chinese center for disease control and prevention |
2010-07-07 |
Shigella flexneri 2a str. 301
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5,839,605
(389,307 x 15)
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15 |
by_platform
by_series |
| 10 |
Genome-wide gene expression and identification of RNA polymerase, RpoD, and RpoS binding sites in Klebsiella pneumoniae MGH 78578 (GSE36055) |
[Oligo Array] Klebsiella pneumoniae MGH 78578 Nimblegen 9822 array (GPL15252) |
University of California, San Diego |
2012-02-23 |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 |
5,692,920
(379,528 x 15)
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15 |
by_platform
by_series |
| 11 |
Comparative Genomics Study of Vibrio cholerae (GSE19108) |
[Oligo Array] Agilent-022729 Vibrio_species_20090128 (GPL9105) |
J Craig Venter Institute |
2009-11-19 |
Vibrio cholerae
 |
5,245,520
(45,220 x 116)
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116 |
by_platform
by_series |
| 12 |
Comparative genomic profiling and gene expression of Escherichia coli O103:H25 Oslo 2006 outbreak strain (GSE9418) |
[Oligo Array] Ecoli_pangenome_CBSDTU_v1 (GPL5647) |
DTU |
2007-10-24 |
Escherichia coli
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4,631,748
(385,979 x 12)
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12 |
by_platform
by_series |
| 13 |
Evidence-based annotation of genes and transcripts in Desulfovibrio vulgaris Hildenborough (tiling array) (GSE29556) |
[Oligo Array] NimbleGen Desulfovibrio vulgaris Hildenborough 2004K (GPL13654) |
Lawrence Berkeley Lab |
2011-05-26 |
Desulfovibrio vulgaris str. Hildenborough
 |
4,007,254
(2,003,627 x 2)
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2 |
by_platform
by_series |
| 14 |
Evidence-based annotation of genes and transcripts in Desulfovibrio vulgaris Hildenborough (GSE29560) |
[Oligo Array] NimbleGen Desulfovibrio vulgaris Hildenborough 2004K (GPL13654) |
Lawrence Berkeley Lab |
2011-05-26 |
Desulfovibrio vulgaris str. Hildenborough
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4,007,254
(2,003,627 x 2)
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2 |
by_platform
by_series |
| 15 |
CGH profiling of Bacillus cereus isolates from the CDC historical strain collection (GSE19125) |
[Oligo Array] JCVI PFGRC Bacillus anthracis 25K vt3b array designed primarily based on strain Sterne (GPL9098) |
The J. Craig Venter Institute |
2009-11-20 |
Bacillus cereus,Bacillus anthracis str. Sterne
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3,992,848
(24,496 x 163)
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163 |
by_platform
by_series |
| 16 |
Characterization of probiotic Escherichia coli isolates using a novel pangenome microarray (GSE8595) |
[Oligo Array] Ecoli_pangenome_CBSDTU_v1 (GPL5647) |
DTU |
2007-07-26 |
Escherichia coli
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3,859,790
(385,979 x 10)
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10 |
by_platform
by_series |
| 17 |
Use of CGH microarrays to identify strain variable genomic regions in C. botulinum ATCC 3502 (GSE16010) |
[Oligo Array] CDC C. botulinum ATCC 3502 CGH 385k array version 1 (GPL6392) |
Centers for Disease Control and Prevention |
2009-05-07 |
Clostridium botulinum
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3,847,710
(384,771 x 10)
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10 |
by_platform
by_series |
| 18 |
The Transcriptionally Active Regions in the Genome of Bacillus subtilis (GSE16086) |
[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486) |
Technical University of Denmark |
2009-05-13 |
Bacillus subtilis subsp. subtilis str. 168
 |
3,831,490
(383,149 x 10)
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10 |
by_platform
by_series |
| 19 |
CGH profiling of Bacillus cereus isolates from the CDC historical strain collection (GSE19125) |
[Oligo Array] JCVI PFGRC Bacillus anthracis 23K vt3a array designed primarily based on strain Sterne (GPL9095) |
The J. Craig Venter Institute |
2009-11-20 |
Bacillus cereus,Bacillus anthracis str. Sterne
|
3,469,400
(22,825 x 152)
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152 |
by_platform
by_series |
| 20 |
Halobacterium NRC-1 Growth curve and GTF perturbation (GSE6776) |
[Oligo Array] ISB Halobacterium Spotted Microarray (GPL3739) |
Institute for Systems Biology |
2007-01-17 |
Halobacterium sp. NRC-1
 |
3,462,144
(10,752 x 322)
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322 |
by_platform
by_series |