Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(7,355)		   Tiling Array
(676)		   cDNA Array
(10,532)		   Oligo Array
(19,682)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(51)		   HT-Seq
(729)		   Other
(57)		   All
(39,082)		  
  brain
(89)		   blood
(312)		   connective
(123)		   reproductive
(41)		   muscular
(90)		   digestive
(193)		   liver
(64)		   lung
(199)		   urinary
(5)		   endo/exo-crine
(69)		   embryo
(4)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(59)		   unclassified
(18,434)		   all
(19,682)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM911187 Space vs. Earth 4,102 University of Florida 2012-04-09 [Oligo Array] Agilent-024017 Custom Bacillus subtilis_15K [BSU number version] (GPL15420) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis Space-exposed spores, 60-min germination Earth control spores, 60-min germination
2 GSM346820 polyamine_chemo_SP4 7,848 Kent State University 2008-12-01 [Oligo Array] UGAmamlab_Silicibacter_pomeroyi_DSS-3_8k_v1.0 (GPL4067) other Ruegeria pomeroyi
Ruegeria pomeroyi		 testis S. pomeroyi DSS3 cells incubated in chemostat with spermidine at 3 mM carbon concentration
3 GSM346818 polyamine_chemo_SP3 7,848 Kent State University 2008-12-01 [Oligo Array] UGAmamlab_Silicibacter_pomeroyi_DSS-3_8k_v1.0 (GPL4067) other Ruegeria pomeroyi
Ruegeria pomeroyi		 testis S. pomeroyi DSS3 cells incubated in chemostat with spermidine at 3 mM carbon concentration
4 GSM346819 polyamine_chemo_SP2 7,848 Kent State University 2008-12-01 [Oligo Array] UGAmamlab_Silicibacter_pomeroyi_DSS-3_8k_v1.0 (GPL4067) other Ruegeria pomeroyi
Ruegeria pomeroyi		 testis S. pomeroyi DSS3 cells incubated in chemostat with spermidine at 3 mM carbon concentration
5 GSM346817 polyamine_chemo_SP1 7,848 Kent State University 2008-12-01 [Oligo Array] UGAmamlab_Silicibacter_pomeroyi_DSS-3_8k_v1.0 (GPL4067) other Ruegeria pomeroyi
Ruegeria pomeroyi		 testis S. pomeroyi DSS3 cells incubated in chemostat with spermidine at 3 mM carbon concentration
6 GSM911188 Mars vs. Earth 4,102 University of Florida 2012-04-09 [Oligo Array] Agilent-024017 Custom Bacillus subtilis_15K [BSU number version] (GPL15420) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis Simulated Mars-exposed spores, 60-min germination Earth control spores, 60-min germination
7 GSM444306 HPC5-HPC5J replicate 3 5,190 University of Nottingham 2009-08-25 [Oligo Array] UON_Campylobacter oligo array v1 (GPL9022) RNA Campylobacter jejuni
Campylobacter jejuni		 placenta Biological replicate 3 of 3. Control HPC5 to HPC5 grown in Jar
8 GSM444305 HPC5-HPC5J replicate 2 5,190 University of Nottingham 2009-08-25 [Oligo Array] UON_Campylobacter oligo array v1 (GPL9022) RNA Campylobacter jejuni
Campylobacter jejuni		 placenta Biological replicate 2 of 3. Control HPC5 toHPC5 grown in Jar
9 GSM444304 HPC5-HPC5J replicate 1 5,190 University of Nottingham 2009-08-25 [Oligo Array] UON_Campylobacter oligo array v1 (GPL9022) RNA Campylobacter jejuni
Campylobacter jejuni		 placenta Biological replicate 1 of 3. Control HPC5 to HPC5 grown in Jar
10 GSM177116 Gene expression during Bacillus subtilis spore germination and outgrowth (t=90) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 90 minutes into outgrowth
11 GSM177115 Gene expression during Bacillus subtilis spore germination and outgrowth (t=80) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 80 minutes into outgrowth
12 GSM177118 Gene expression during Bacillus subtilis spore germination and outgrowth (t=70) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 70 minutes into outgrowth
13 GSM177114 Gene expression during Bacillus subtilis spore germination and outgrowth (t=60) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 60 minutes into outgrowth
14 GSM177113 Gene expression during Bacillus subtilis spore germination and outgrowth (t=50) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 50 minutes into outgrowth
15 GSM177106 Gene expression during Bacillus subtilis spore germination and outgrowth (t=5) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 5 minutes into outgrowth
16 GSM177112 Gene expression during Bacillus subtilis spore germination and outgrowth (t=40) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 40 minutes into outgrowth
17 GSM177111 Gene expression during Bacillus subtilis spore germination and outgrowth (t=30) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 30 minutes into outgrowth
18 GSM177110 Gene expression during Bacillus subtilis spore germination and outgrowth (t=25) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 25 minutes into outgrowth
19 GSM177109 Gene expression during Bacillus subtilis spore germination and outgrowth (t=20) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 20 minutes into outgrowth
20 GSM177108 Gene expression during Bacillus subtilis spore germination and outgrowth (t=15) 4,008 TNO 2007-03-23 [Oligo Array] Bacillus subtilis 168 spotted oligo array2 (GPL4415) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168		 testis germinated spores, 15 minutes into outgrowth
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