Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(8,349)
  Tiling Array
(1,464)
  cDNA Array
(10,807)
  Oligo Array
(21,920)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(51)
  HT-Seq
(2,336)
  Other
(164)
  All
(45,091)
 
  brain
(90)
  blood
(355)
  connective
(131)
  reproductive
(78)
  muscular
(90)
  digestive
(223)
  liver
(65)
  lung
(199)
  urinary
(5)
  endo/exo-crine
(69)
  embryo
(20)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(143)
  unclassified
(20,452)
  all
(21,920)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM911187 Space vs. Earth 4,102 University of Florida 2012-04-09 [Oligo Array] Agilent-024017 Custom Bacillus subtilis_15K [BSU number version] (GPL15420) RNA Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168
testis Space-exposed spores, 60-min germination Earth control spores, 60-min germination
2 GSM1084747 S.coelicolor germination_time dormant_replicate 3 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time dormant proportional mixture of RNA samples from all time points
3 GSM1084746 S.coelicolor germination_time dormant_replicate 2 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time dormant proportional mixture of RNA samples from all time points
4 GSM1084745 S.coelicolor germination_time dormant_replicate 1 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time dormant proportional mixture of RNA samples from all time points
5 GSM1084781 S.coelicolor germination_time 5.5 h_replicate 3 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 5.5 h proportional mixture of RNA samples from all time points
6 GSM1084780 S.coelicolor germination_time 5.5 h_replicate 2 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 5.5 h proportional mixture of RNA samples from all time points
7 GSM1084779 S.coelicolor germination_time 5.5 h_replicate 1 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 5.5 h proportional mixture of RNA samples from all time points
8 GSM1084778 S.coelicolor germination_time 5 h_replicate 3 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 5 h proportional mixture of RNA samples from all time points
9 GSM1084777 S.coelicolor germination_time 5 h_replicate 2 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 5 h proportional mixture of RNA samples from all time points
10 GSM1084776 S.coelicolor germination_time 5 h_replicate 1 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 5 h proportional mixture of RNA samples from all time points
11 GSM1084775 S.coelicolor germination_time 4.5 h_replicate 3 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 4.5 h proportional mixture of RNA samples from all time points
12 GSM1084774 S.coelicolor germination_time 4.5 h_replicate 2 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 4.5 h proportional mixture of RNA samples from all time points
13 GSM1084773 S.coelicolor germination_time 4.5 h_replicate 1 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 4.5 h proportional mixture of RNA samples from all time points
14 GSM1084772 S.coelicolor germination_time 4 h_replicate 3 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 4 h proportional mixture of RNA samples from all time points
15 GSM1084771 S.coelicolor germination_time 4 h_replicate 2 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 4 h proportional mixture of RNA samples from all time points
16 GSM1084770 S.coelicolor germination_time 4 h_replicate 1 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 4 h proportional mixture of RNA samples from all time points
17 GSM1084769 S.coelicolor germination_time 3.5 h_replicate 3 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 3.5 h proportional mixture of RNA samples from all time points
18 GSM1084768 S.coelicolor germination_time 3.5 h_replicate 2 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 3.5 h proportional mixture of RNA samples from all time points
19 GSM1084767 S.coelicolor germination_time 3.5 h_replicate 1 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 3.5 h proportional mixture of RNA samples from all time points
20 GSM1084766 S.coelicolor germination_time 3 h_replicate 3 22,400 Institute of Microbiology Czech Academy of Sciences 2013-02-20 [Oligo Array] Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K (GPL16698) RNA Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
testis S.coelicolor germination time 3 h proportional mixture of RNA samples from all time points
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