Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(19,942)

Invertebrates
(1,821)

Bacteria
(1,751)

Phages
(0)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(35)

Other
(0)

brain
(0)

reproductive
(0)

muscular
(0)

digestive
(0)

liver
(2)

lung
(2)

urinary
(2)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(0)

unclassified
(0)

all
(35)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM604832	qRT-PCR on Staphylococcus aureus strain US300	2,647	J Craig Venter Institute	2010-10-05	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	lung	Staphylococcus aureus strain USA300 during mouse lung infection
2	GSM604850	qRT-PCR on Staphylococcus aureus strain TB15	2,647	J Craig Venter Institute	2010-10-05	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	lung	Staphylococcus aureus strain TB15 during mouse lung infection
3	GSM605598	qRT-PCR on Staphylococcus aureus strain TB15 in liver	2,647	J Craig Venter Institute	2010-10-06	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	liver/hepato	Staphylococcus aureus strain TB15 during mouse liver infection
4	GSM605599	qRT-PCR on Staphylococcus aureus strain US300 in liver	2,647	J Craig Venter Institute	2010-10-06	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	liver/hepato	Staphylococcus aureus strain US300 during mouse liver infection
5	GSM605604	qRT-PCR on Staphylococcus aureus strain TB15 in kidney	2,647	J Craig Venter Institute	2010-10-06	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	kidney	Staphylococcus aureus strain TB-15 during mouse kidney infection
6	GSM605605	qRT-PCR on Staphylococcus aureus strain US300 in kidney	2,647	J Craig Venter Institute	2010-10-06	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	kidney	Staphylococcus aureus strain US300 during mouse kidney infection
7	GSM608544	qRT-PCR on Staphylococcus aureus strain US300 in skin	2,647	J Craig Venter Institute	2010-10-14	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	skin	Staphylococcus aureus strain US300 during mouse skin infection
8	GSM608610	qRT-PCR on Staphylococcus aureus strain TB15 in skin	2,647	J Craig Venter Institute	2010-10-14	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	skin	Staphylococcus aureus strain TB15 during mouse skin infection
9	GSM608624	qRT-PCR on Staphylococcus aureus strain US300 in neutophil	2,263	J Craig Venter Institute	2010-10-14	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	peripheral blood	Staphylococcus aureus strain USA300 during human neutrophil infection
10	GSM608625	qRT-PCR on Staphylococcus aureus strain TB-15 in neutophil	2,263	J Craig Venter Institute	2010-10-14	[RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963)	RNA	Staphylococcus aureus	peripheral blood	Staphylococcus aureus strain TB-15 during human neutrophil infection
11	GSM627780	qRT-PCR of F. tularensis strain 2827G at 0 hours after infection (control)	1,068	J Craig Venter Institute	2010-11-22	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain 2827G at 0 hours after infection dendritic cell model
12	GSM628527	qRT-PCR of F. tularensis strain 2827G at 45 min after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain 2827G at 45 min after infection dendritic cell model
13	GSM628528	qRT-PCR of F. tularensis strain 2827G at 2 hours after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain 2827G at 2 hours after infection dendritic cell model
14	GSM628529	qRT-PCR of F. tularensis strain 2827G at 4 hours after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain 2827G at 4 hours after infection dendritic cell model
15	GSM628726	qRT-PCR of F. tularensis strain 2827G at 8 hours after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain 2827G at 8 hours after infection dendritic cell model
16	GSM629014	qRT-PCR of F. tularensis strain Schu S4 at 0 hours after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain Schu S4 at 0 hours after infection dendritic cell model
17	GSM629016	qRT-PCR of F. tularensis strain Schu S4 at 2 hours after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain Schu S4 at 0 hours after infection dendritic cell model
18	GSM629018	qRT-PCR of F. tularensis strain Schu S4 at 4 hours after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain Schu S4 at 4 hours after infection dendritic cell model
19	GSM629020	qRT-PCR of F. tularensis strain Schu S4 at 8 hours after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain Schu S4 at 8 hours after infection dendritic cell model
20	GSM629021	qRT-PCR of F. tularensis strain Schu S4 at 45 min after infection	1,068	J Craig Venter Institute	2010-11-23	[RT-PCR] Francisella tularensis full genome qRT-PCR (GPL10974)	RNA	Francisella tularensis	lymphnode	F. tularensis strain Schu S4 at 45min after infection dendritic cell model

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