Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Bacteria
(39,613)

Viruses
(1,263)

Phages
(101)

Unclassified
(5,497)

All
(931,947)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(7,463)

Tiling Array
(684)

cDNA Array
(10,536)

Oligo Array
(19,945)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

brain
(0)

connective
(0)

reproductive
(0)

muscular
(0)

digestive
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(6)

embryo
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(0)

unclassified
(652)

all
(684)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM547633	FnrL_rep 1	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:FnrL ChIP DNA Input DNA title:FnrL_rep 1 description:ChIP-chip FnrL in wild-type cells
2	GSM547634	FnrL_rep 2	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:FnrL ChIP DNA Input DNA title:FnrL_rep 2 description:ChIP-chip FnrL in wild-type cells
3	GSM547635	FnrL_rep 3	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:FnrL ChIP DNA Input DNA title:FnrL_rep 3 description:ChIP-chip FnrL in wild-type cells
4	GSM547636	Beta'_rep 1	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Beta' ChIP DNA Input DNA title:Beta'_rep 1 description:ChIP-chip Beta' in wild-type cells
5	GSM547637	Beta'_rep 2	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Beta' ChIP DNA Input DNA title:Beta'_rep 2 description:ChIP-chip Beta' in wild-type cells
6	GSM547638	Beta'_rep 3	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Beta' ChIP DNA Input DNA title:Beta'_rep 3 description:ChIP-chip Beta' in wild-type cells
7	GSM547639	Sigma70_rep_1	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Sigma70 ChIP DNA Input DNA title:Sigma70_rep_1 description:ChIP-chip sigma70 in Wild-type cells
8	GSM547640	Sigma70_rep_2	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Sigma70 ChIP DNA Input DNA title:Sigma70_rep_2 description:ChIP-chip sigma70 in Wild-type cells
9	GSM547641	Sigma70_rep_3	353,081	University of Wisconsin - Madison	2010-05-27	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Sigma70 ChIP DNA Input DNA title:Sigma70_rep_3 description:ChIP-chip sigma70 in Wild-type cells
10	GSM560310	RpoE_DeltaChrR_rep 1	353,081	University of Wisconsin - Madison	2010-06-25	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoE ChIP DNA from DeltaChrR cells Input DNA from DeltaChrR cells title:RpoE_DeltaChrR_rep 1 description:ChIP-chip RpoE in DeltaChrR cells
11	GSM560311	RpoE_DeltaChrR_rep 2	353,081	University of Wisconsin - Madison	2010-06-25	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoE ChIP DNA from DeltaChrR cells Input DNA from DeltaChrR cells title:RpoE_DeltaChrR_rep 2 description:ChIP-chip RpoE in DeltaChrR cells
12	GSM560312	RpoE_DeltaChrR_rep 3	353,081	University of Wisconsin - Madison	2010-06-25	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoE ChIP DNA from DeltaChrR cells Input DNA from DeltaChrR cells title:RpoE_DeltaChrR_rep 3 description:ChIP-chip RpoE in DeltaChrR cells
13	GSM560313	Beta'_DeltaChrR_rep 1	353,081	University of Wisconsin - Madison	2010-06-25	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Beta' ChIP DNA from DeltaChrR cells Input DNA from DeltaChrR cells title:Beta'_DeltaChrR_rep 1 description:ChIP-chip Beta' in DeltaChrR cells
14	GSM560314	Beta'_DeltaChrR_rep 2	353,081	University of Wisconsin - Madison	2010-06-25	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Beta' ChIP DNA from DeltaChrR cells Input DNA from DeltaChrR cells title:Beta'_DeltaChrR_rep 2 description:ChIP-chip Beta' in DeltaChrR cells
15	GSM560315	Beta'_DeltaChrR_rep 3	353,081	University of Wisconsin - Madison	2010-06-25	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:Beta' ChIP DNA from DeltaChrR cells Input DNA from DeltaChrR cells title:Beta'_DeltaChrR_rep 3 description:ChIP-chip Beta' in DeltaChrR cells
16	GSM978036	RpoHI_FLAG replicate 1	353,081	University of Wisconsin - Madison	2012-07-29	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoHI_FLAG ChIP DNA Input DNA title:RpoHI_FLAG replicate 1
17	GSM978037	RpoHI_FLAG replicate 2	353,081	University of Wisconsin - Madison	2012-07-29	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoHI_FLAG ChIP DNA Input DNA title:RpoHI_FLAG replicate 2
18	GSM978038	RpoHI_FLAG replicate 3	353,081	University of Wisconsin - Madison	2012-07-29	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoHI_FLAG ChIP DNA Input DNA title:RpoHI_FLAG replicate 3
19	GSM978039	RpoHII replicate 1	353,081	University of Wisconsin - Madison	2012-07-29	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoHII ChIP DNA Input DNA title:RpoHII replicate 1
20	GSM978040	RpoHII replicate 2	353,081	University of Wisconsin - Madison	2012-07-29	[Tiling Array] UW_Rhodobacter_sphaeroides_2.4.1_385K_v2 (GPL10463)	genomic	Rhodobacter sphaeroides 2.4.1	unclassified	source_name:RpoHII ChIP DNA Input DNA title:RpoHII replicate 2

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