Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(1)
  Primates
(1)
  Rodents
(2)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(1)
  Plants
(3)
  Bacteria
(1)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(9)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(1)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(0)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(1)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL199 [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array 7,312 Affymetrix, Inc. 2002-07-01 Affymetrix Escherichia coli K-12
Escherichia coli K-12
GeneChip in situ oligonucleotide, [Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Has 7312 entries and was indexed 20-May-2002. The GeneChip E. coli Antisense Genome Array can be used for examining expression of all known E. coli genes and discovering novel, uncharacterized intergenic transcripts. The array contains probe sets to detect the antisense strand of more than 4,200 known open reading frames. In addition, over 1,350 intergenic sequences can be interrogated in both directions permitting functional characterization of potentially important shorter expressed sequences. Sequence information for probes on the array correspond to the M49 version of the E. coli Genome Project database at the University of Wisconsin. Keywords = high density oligonucleotide array