| 1 |
GPL9468 |
Mycobacterium smegmatis MC2 155 241K Whole Genome Tilling Array |
240,971 |
University of Toronto |
2009-10-20 |
Agilent Technologies |
Mycobacterium smegmatis str. MC2 155
 |
Oligo Array |
in situ oligonucleotide, Mycobacterium smegmatis MC2 155 241K Whole Genome Tilling Array, |
| 2 |
GPL9467 |
Mycobacterium tuberculosis H37Rv 241K Whole Genome Tilling Array |
240,851 |
University of Toronto |
2009-10-20 |
Agilent Technologies |
Mycobacterium tuberculosis H37Rv
 |
Oligo Array |
in situ oligonucleotide, Mycobacterium tuberculosis H37Rv 241K Whole Genome Tilling Array, |
| 3 |
GPL10008 |
Oxford Gene Technology Chip2 Salmonella typhimurium microarray SL1344 strain product code: 010021 |
43,452 |
McMaster University |
2010-02-04 |
Oxford Gene Technologies (OGT) |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
 |
Oligo Array |
in situ oligonucleotide, Oxford Gene Technology Chip2 Salmonella typhimurium microarray SL1344 strain product code: 010021, |
| 4 |
GPL3918 |
MERH03-S1-0002 (Rhodococcus sp. RHA1 22K) |
22,080 |
University of British Columbia |
2006-06-23 |
The Microarray Facility of the Prostate Centre at Vancouver General Hospital |
Rhodococcus jostii RHA1
 |
Oligo Array |
spotted oligonucleotide, MERH03-S1-0002 (Rhodococcus sp. RHA1 22K), |
| 5 |
GPL13208 |
University of Alberta Escherichia coli 3x6K microarray |
21,168 |
University of Alberta |
2011-02-18 |
Microarray and Proteomics Facility, Dept. of Biological Sciences, U Alberta, Edmonton, Canada |
Escherichia coli
 |
Oligo Array |
spotted oligonucleotide, University of Alberta Escherichia coli 3x6K microarray, |
| 6 |
GPL8499 |
sm6koligo |
20,160 |
MCMASTER UNIVERSITY |
2009-04-29 |
Center for Biotechnology (CeBiTec), Bielefeld university,Germany |
Sinorhizobium meliloti 1021
 |
Oligo Array |
spotted oligonucleotide, sm6koligo, Array with 20160 features, in 48 zones, with 6229 biosequences representing 6230 reporters and 0 composite sequences, with surface type epoxy. (Submitter's description 1): Sm6kOligo microarrays represent all currently predicted protein-coding genes of the soil bacterium Sinorhizobium meliloti 1021 |
| 7 |
GPL9981 |
UofT KB1 19.2K v2 |
19,200 |
University of toronto |
2010-01-26 |
University Health Network (UHN) Microarray Facility, Toronto, Ontario, www.microarrays.ca |
dechlorinating enrichment culture KB-1
 |
cDNA Array |
spotted DNA/cDNA, UofT KB1 19.2K v2, KB1 mixed microbial consortium. Composition of community as estimated by 16S qPCR: Dehalococcoides:48.1-70.2% Chlorobi SJA-28:6-14.9% Acetobacterium:2.65-12% Sporomusa:1.2-11.45% Spirochaete SA-8 :2.8-8.3% Methanomicrobiales:3.5-5.8% OP5:2.5-5% Geobacter:3-4.4% Methanosarcina:0.1-1% Methanosaeta:0-0% Bacteroidales 1:0-0.8% Syntrophus:0-0.03% Syntrophobacter:0-0.2% Sulfurospirillum:0-0.002% Methanomethylvorans:0-0.04% |
| 8 |
GPL14872 |
Salmonella enterica serovar Typhimurium, LT2 (SGSC1412), version 8 |
13,872 |
The University of British Columbia |
2011-11-09 |
NIAID’s Pathogen Functional Genomics Resource Center, managed and funded by Division of Microbiology and Infectious Diseases, NIAID, NIH, DHHS and operated by the J. Craig Venter Institute |
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
 |
Oligo Array |
spotted oligonucleotide, Salmonella enterica serovar Typhimurium, LT2 (SGSC1412), version 8, |
| 9 |
GPL6779 |
AsalChip2 (NRC-IBS Aeromonas salmonicida A449) |
12,288 |
National Research Council |
2008-04-24 |
NRC-BRI |
Aeromonas salmonicida subsp. salmonicida A449
 |
cDNA Array |
spotted DNA/cDNA, AsalChip2 (NRC-IBS Aeromonas salmonicida A449), PCR primers were designed for 4293 ORFs from the completed genomic sequence of Aeromonas salmonicida A449 which comprises 4413 ORFs on one chromosome and two large plasmids. Good amplicons of length greater than 160 nt were obtained for 4237 ORFs representing >95% coverage of ORFs. All amplicons are spotted in duplicate on the microarray and sheared total genomic DNA from A. salmonicida and salmon DNA were spotted in the corners of each subarray as controls. |
| 10 |
GPL6703 |
MERH03-S1-0003 (Rhodococcus sp. RHA1 11K) |
11,232 |
University of British Columbia |
2008-04-07 |
The Microarray Facility of the Prostate Centre at Vancouver General Hospital |
Rhodococcus jostii RHA1
|
Oligo Array |
spotted oligonucleotide, MERH03-S1-0003 (Rhodococcus sp. RHA1 11K), |
| 11 |
GPL8255 |
Streptococcus mutans 10.7K oligonucleotide array version 1 |
10,752 |
Dalhousie University |
2009-03-05 |
The Pathogen Functional Genomic Resource Center (PFGRC) |
Streptococcus mutans UA159
 |
Oligo Array |
spotted oligonucleotide, Streptococcus mutans 10.7K oligonucleotide array version 1, |
| 12 |
GPL8893 |
McGill/Behr lab_M. tuberculosis_10K_v1.0 |
10,080 |
Research Institute of McGill University Health Centre |
2009-07-21 |
Laboratory of Dr. Marcel Behr Molecular Epidemiology of Infectious Diseases Montreal General Hospital Research Institute McGill University Health Center Montreal, Quebec, Canada |
Mycobacterium tuberculosis
 |
Oligo Array |
in situ oligonucleotide, McGill/Behr lab_M. tuberculosis_10K_v1.0, Contact information for the platform: Dr. Marcel A. Behr Division of Infectious Diseases and Medical Microbiology A5-156, Montreal General Hospital 1650 Cedar Avenue Montreal, QC H3G 1A4 Canada |
| 13 |
GPL3502 |
Eurogentec Bacillus subtilis microarray |
9,216 |
University of British Columbia |
2006-03-02 |
Eurogentec |
Bacillus subtilis
 |
cDNA Array |
spotted DNA/cDNA, Eurogentec Bacillus subtilis microarray, |
| 14 |
GPL6178 |
E. coli K12, Sakai and EDL933 genes (MGW oligonucleotide) |
6,912 |
University of Montreal |
2007-11-22 |
Genomics Core Facility, National Microbiology Laboratory, Canadian Science Centre for Human and Animal Health, Public Health Agency of Canada. |
Escherichia coli
|
Oligo Array |
spotted oligonucleotide, E. coli K12, Sakai and EDL933 genes (MGW oligonucleotide), |
| 15 |
GPL7001 |
Ryerson University E-coli O157:H7 MWG 7K array version 1 |
6,176 |
Ryerson University |
2008-06-26 |
Public Health Agency of Canada |
Escherichia coli
|
Oligo Array |
spotted oligonucleotide, Ryerson University E-coli O157:H7 MWG 7K array version 1, |
| 16 |
GPL15586 |
NimbleGen S. meliloti 4-plex expression array 72K [081103_Sm_RM_EXP] |
6,096 |
McMaster University |
2012-05-21 |
NimbleGen |
Sinorhizobium meliloti
 |
Oligo Array |
in situ oligonucleotide, NimbleGen S. meliloti 4-plex expression array 72K [081103_Sm_RM_EXP], Design name: 081103_Sm_RM_EXP |
| 17 |
GPL5767 |
Escherichia coli 6k oligo microarray |
5,990 |
University of British Columbia |
2007-08-23 |
Microarray Facility, Prostate Centre at Vancouver General Hospital |
Escherichia coli
|
Oligo Array |
spotted oligonucleotide, Escherichia coli 6k oligo microarray, |
| 18 |
GPL352 |
CampyChip1.2 |
5,760 |
National Research Council |
2003-07-10 |
|
Campylobacter jejuni
 |
cDNA Array |
spotted DNA/cDNA, CampyChip1.2, A microarray with 5760 spot features corresponding to almost all ORFs in the Campylobacter jejuni 11168 genome (spots in triplicate). Blocks per chip:24 Columns per block:15 Rows per block:16 |
| 19 |
GPL6658 |
AppChip2 (NRC-IBS Actinobacillus pleuropneumoniae L20) |
5,376 |
National Research Council |
2008-03-27 |
NRC-BRI |
Actinobacillus pleuropneumoniae serovar 5b str. L20
 |
cDNA Array |
spotted DNA/cDNA, AppChip2 (NRC-IBS Actinobacillus pleuropneumoniae L20), PCR primers were designed for 1954 ORFs from the completed genomic sequence of Actinobacillus pleuropneumoniae L20 which comprised 2012 ORFs. Good amplicons of length greater than 160 nt were obtained for 1846 ORFs representing 92% coverage of ORFs. All amplicons are spotted in duplicate on the microarray and sheared total genomic DNA from A. pleuropneumoniae L20 and porcine DNA were spotted in the bottom row of each subarray as controls. |
| 20 |
GPL6948 |
CampyChip4 |
5,376 |
National Research Council |
2008-06-10 |
NRC-BRI |
Campylobacter jejuni
|
cDNA Array |
spotted DNA/cDNA, CampyChip4, Campylobacter jejuni microarray with amplicons corresponding to 1561 genes from strain NCTC 11168 and 238 additional genes from strain RM1221 plus 47 from strain 81-176 as well as selected genes from other strains. All genes are spotted in duplicate and sheared total genomic DNA from strain NCTC 11168 was used as a control. |