Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(12)

Primates
(0)

Rodents
(39)

Mammals
(10)

Vertebrates
(0)

Invertebrates
(0)

Plants
(21)

Bacteria
(24)

Viruses
(0)

Phages
(0)

Unclassified
(0)

All
(106)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(6)

Tiling Array
(0)

cDNA Array
(0)

Oligo Array
(18)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(0)

Other
(0)

All
(24)

brain
(0)

blood
(0)

connective
(0)

reproductive
(0)

muscular
(0)

digestive
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(0)

unclassified
(24)

all
(24)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM570257	Bsub_AH024_LPDM_exp_rep1	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
2	GSM570258	Bsub_AH024_LPDM_T3_rep1	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
3	GSM570259	Bsub_AH024_LPDM_exp_rep2	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
4	GSM570260	Bsub_168_HPDM_exp_rep1	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep1 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
5	GSM570261	Bsub_168_HPDM_exp_rep2	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep2 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the second of three 168 biological replicates used in this experiment, each from separate cultures.
6	GSM570262	Bsub_168_LPDM_exp_rep1	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, LPDM, exponential growth phase title:Bsub_168_LPDM_exp_rep1 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during exponential growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
7	GSM570263	Bsub_AH024_LPDM_T3_rep2	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
8	GSM570264	Bsub_AH024_HPDM_exp_rep1	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, HPDM, exponential growth phase title:Bsub_AH024_HPDM_exp_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in HPDM and harvested during exponential growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
9	GSM570265	Bsub_AH024_HPDM_exp_rep2	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, HPDM, exponential growth phase title:Bsub_AH024_HPDM_exp_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in HPDM and harvested during exponential growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
10	GSM570266	Bsub_168_LPDM_T3_rep1	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, LPDM, T3 growth phase title:Bsub_168_LPDM_T3_rep1 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during T3 growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
11	GSM570267	Bsub_168_HPDM_exp_rep3	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep3 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the third of three 168 biological replicates used in this experiment, each from separate cultures.
12	GSM570268	Bsub_168_LPDM_T3_rep2	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, LPDM, T3 growth phase title:Bsub_168_LPDM_T3_rep2 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during T3 growth phase. It is the second of three 168 biological replicates used in this experiment, each from separate cultures.
13	GSM570269	Bsub_168_LPDM_exp_rep2	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, LPDM, exponential growth phase title:Bsub_168_LPDM_exp_rep2 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during exponential growth phase. It is the second of three 168 biological replicates used in this experiment, each from separate cultures.
14	GSM570270	Bsub_AH024_HPDM_exp_rep3	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, HPDM, exponential growth phase title:Bsub_AH024_HPDM_exp_rep3 description:This sample is of Bacillus subtilis strain AH024 grown in HPDM and harvested during exponential growth phase. It is the third of three AH024 biological replicates used in this experiment, each from separate cultures.
15	GSM570271	Bsub_AH024_LPDM_exp_rep3	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep3 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the third of three AH024 biological replicates used in this experiment, each from separate cultures.
16	GSM570272	Bsub_168_LPDM_exp_rep3	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, LPDM, exponential growth phase title:Bsub_168_LPDM_exp_rep3 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during exponential growth phase. It is the third of three 168 biological replicates used in this experiment, each from separate cultures.
17	GSM570273	Bsub_AH024_LPDM_T3_rep3	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep3 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the third of three AH024 biological replicates used in this experiment, each from separate cultures.
18	GSM570274	Bsub_168_LPDM_T3_rep3	383,149	Trinity College Dublin	2010-07-26	[Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 (GPL8486)	RNA	Bacillus subtilis	unclassified	source_name:Bacillus subtilis strain 168, LPDM, T3 growth phase title:Bsub_168_LPDM_T3_rep3 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during T3 growth phase. It is the third of three 168 biological replicates used in this experiment, each from separate cultures.
19	GSM573322	PA2206 mutant_H2O2_10mins_rep1	5,900	BIOMERIT Research Centre	2010-08-02	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:P. aeruginosa PA2206 mutant_1mM H2O2_10mins_rep1 title:PA2206 mutant_H2O2_10mins_rep1 description:Gene expression data from PA2206 mutant strain.
20	GSM573323	PA2206 mutant_H2O2_10mins_rep2	5,900	BIOMERIT Research Centre	2010-08-02	[GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84)	RNA	Pseudomonas aeruginosa	unclassified	source_name:P. aeruginosa PA2206 mutant_1mM H2O2_10mins_rep2 title:PA2206 mutant_H2O2_10mins_rep2 description:Gene expression data from PA2206 mutant strain.

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