Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(12)
  Primates
(0)
  Rodents
(39)
  Mammals
(10)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(21)
  Bacteria
(24)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(106)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(6)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(18)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(24)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(24)
  all
(24)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM570257 Bsub_AH024_LPDM_exp_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
2 GSM570258 Bsub_AH024_LPDM_T3_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
3 GSM570259 Bsub_AH024_LPDM_exp_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
4 GSM570260 Bsub_168_HPDM_exp_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep1 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
5 GSM570261 Bsub_168_HPDM_exp_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep2 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the second of three 168 biological replicates used in this experiment, each from separate cultures.
6 GSM570262 Bsub_168_LPDM_exp_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, LPDM, exponential growth phase title:Bsub_168_LPDM_exp_rep1 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during exponential growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
7 GSM570263 Bsub_AH024_LPDM_T3_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
8 GSM570264 Bsub_AH024_HPDM_exp_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, HPDM, exponential growth phase title:Bsub_AH024_HPDM_exp_rep1 description:This sample is of Bacillus subtilis strain AH024 grown in HPDM and harvested during exponential growth phase. It is the first of three AH024 biological replicates used in this experiment, each from separate cultures.
9 GSM570265 Bsub_AH024_HPDM_exp_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, HPDM, exponential growth phase title:Bsub_AH024_HPDM_exp_rep2 description:This sample is of Bacillus subtilis strain AH024 grown in HPDM and harvested during exponential growth phase. It is the second of three AH024 biological replicates used in this experiment, each from separate cultures.
10 GSM570266 Bsub_168_LPDM_T3_rep1 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, LPDM, T3 growth phase title:Bsub_168_LPDM_T3_rep1 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during T3 growth phase. It is the first of three 168 biological replicates used in this experiment, each from separate cultures.
11 GSM570267 Bsub_168_HPDM_exp_rep3 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, HPDM, exponential growth phase title:Bsub_168_HPDM_exp_rep3 description:This sample is of Bacillus subtilis strain 168 grown in HPDM and harvested during exponential growth phase. It is the third of three 168 biological replicates used in this experiment, each from separate cultures.
12 GSM570268 Bsub_168_LPDM_T3_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, LPDM, T3 growth phase title:Bsub_168_LPDM_T3_rep2 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during T3 growth phase. It is the second of three 168 biological replicates used in this experiment, each from separate cultures.
13 GSM570269 Bsub_168_LPDM_exp_rep2 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, LPDM, exponential growth phase title:Bsub_168_LPDM_exp_rep2 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during exponential growth phase. It is the second of three 168 biological replicates used in this experiment, each from separate cultures.
14 GSM570270 Bsub_AH024_HPDM_exp_rep3 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, HPDM, exponential growth phase title:Bsub_AH024_HPDM_exp_rep3 description:This sample is of Bacillus subtilis strain AH024 grown in HPDM and harvested during exponential growth phase. It is the third of three AH024 biological replicates used in this experiment, each from separate cultures.
15 GSM570271 Bsub_AH024_LPDM_exp_rep3 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, exponential growth phase title:Bsub_AH024_LPDM_exp_rep3 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during exponential growth phase. It is the third of three AH024 biological replicates used in this experiment, each from separate cultures.
16 GSM570272 Bsub_168_LPDM_exp_rep3 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, LPDM, exponential growth phase title:Bsub_168_LPDM_exp_rep3 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during exponential growth phase. It is the third of three 168 biological replicates used in this experiment, each from separate cultures.
17 GSM570273 Bsub_AH024_LPDM_T3_rep3 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain AH024, LPDM, T3 growth phase title:Bsub_AH024_LPDM_T3_rep3 description:This sample is of Bacillus subtilis strain AH024 grown in LPDM and harvested during T3 growth phase. It is the third of three AH024 biological replicates used in this experiment, each from separate cultures.
18 GSM570274 Bsub_168_LPDM_T3_rep3 383,149 Trinity College Dublin 2010-07-26 [Oligo Array] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) RNA Bacillus subtilis
Bacillus subtilis
unclassified source_name:Bacillus subtilis strain 168, LPDM, T3 growth phase title:Bsub_168_LPDM_T3_rep3 description:This sample is of Bacillus subtilis strain 168 grown in LPDM and harvested during T3 growth phase. It is the third of three 168 biological replicates used in this experiment, each from separate cultures.
19 GSM573322 PA2206 mutant_H2O2_10mins_rep1 5,900 BIOMERIT Research Centre 2010-08-02 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:P. aeruginosa PA2206 mutant_1mM H2O2_10mins_rep1 title:PA2206 mutant_H2O2_10mins_rep1 description:Gene expression data from PA2206 mutant strain.
20 GSM573323 PA2206 mutant_H2O2_10mins_rep2 5,900 BIOMERIT Research Centre 2010-08-02 [GeneChip] [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array (GPL84) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa
unclassified source_name:P. aeruginosa PA2206 mutant_1mM H2O2_10mins_rep2 title:PA2206 mutant_H2O2_10mins_rep2 description:Gene expression data from PA2206 mutant strain.
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