Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(16,283)		   Primates
(80)		   Rodents
(6,896)		   Mammals
(298)		   Vertebrates
(469)		   Invertebrates
(517)		   Plants
(5,385)		   Bacteria
(1,328)		   Viruses
(9)		   Phages
(0)		   Unclassified
(100)		   All
(31,365)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(817)		   Tiling Array
(61)		   cDNA Array
(147)		   Oligo Array
(298)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(5)		   Other
(0)		   All
(1,328)		  
  brain
(0)		   blood
(12)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(0)		   all
(1,328)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM973482 KT2440_2hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440 title:KT2440_2hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
2 GSM973483 KT2440_4hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440 title:KT2440_4hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
3 GSM973484 KT2440_6hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440 title:KT2440_6hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
4 GSM973485 KT2440_8hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440 title:KT2440_8hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
5 GSM973486 KT2440(pCAR1)_2hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440(pCAR1) title:KT2440(pCAR1)_2hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
6 GSM973487 KT2440(pCAR1)_4hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440(pCAR1) title:KT2440(pCAR1)_4hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
7 GSM973488 KT2440(pCAR1)_6hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440(pCAR1) title:KT2440(pCAR1)_6hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
8 GSM973489 KT2440(pCAR1)_8hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas putida KT2440 chromosome Array (GPL8296) RNA Pseudomonas putida
Pseudomonas putida		 unclassified source_name:cDNA prepared from succinate culture of KT2440(pCAR1) title:KT2440(pCAR1)_8hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FR-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FF-3.bpmap represents the reverse strand of KT2440 chromosome.
9 GSM973490 PAO1_2hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1 title:PAO1_2hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
10 GSM973491 PAO1_4hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1 title:PAO1_4hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
11 GSM973492 PAO1_6hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1 title:PAO1_6hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
12 GSM973493 PAO1_8hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1 title:PAO1_8hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
13 GSM973494 PAO1(pCAR1)_2hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1(pCAR1) title:PAO1(pCAR1)_2hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
14 GSM973495 PAO1(pCAR1)_4hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1(pCAR1) title:PAO1(pCAR1)_4hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
15 GSM973496 PAO1(pCAR1)_6hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1(pCAR1) title:PAO1(pCAR1)_6hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
16 GSM973497 PAO1(pCAR1)_8hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas aeruginosa PAO1 chromosome array (GPL8297) RNA Pseudomonas aeruginosa
Pseudomonas aeruginosa		 unclassified source_name:cDNA prepared from succinate culture of PAO1(pCAR1) title:PAO1(pCAR1)_8hr description:This is an Affymetrix custom-commercial tiling array that covers the Pseudomonas aeruginosa PAO1 chromosome (RefSeq: NC_002516) at 11-bp density. BPMAP files are provided as supplementary files. PAO1b520519FF-3.bpmap represents the forward strand of PAO1chromosome, and PAO1b520519FR-3.bpmap represents the reverse strand of PAO1 chromosome.
17 GSM973498 Pf0-1_1hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas fluorescens Pf0-1 chromosome array (GPL8298) RNA Pseudomonas fluorescens
Pseudomonas fluorescens		 unclassified source_name:cDNA prepared from succinate culture of Pf0-1 title:Pf0-1_1hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas fluorescens Pf0-1 chromosome (RefSeq: NC_007492) at 11-bp density. BPMAP files are provided as supplementary files. PFO1b520543F-3-REV.bpmap represents the forward strand of Pf0-1 chromosome, and PFO1b520543F-3-FWD.bpmap represents the reverse strand of Pf0-1 chromosome.
18 GSM973499 Pf0-1_3hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas fluorescens Pf0-1 chromosome array (GPL8298) RNA Pseudomonas fluorescens
Pseudomonas fluorescens		 unclassified source_name:cDNA prepared from succinate culture of Pf0-1 title:Pf0-1_3hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas fluorescens Pf0-1 chromosome (RefSeq: NC_007492) at 11-bp density. BPMAP files are provided as supplementary files. PFO1b520543F-3-REV.bpmap represents the forward strand of Pf0-1 chromosome, and PFO1b520543F-3-FWD.bpmap represents the reverse strand of Pf0-1 chromosome.
19 GSM973500 Pf0-1_5hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas fluorescens Pf0-1 chromosome array (GPL8298) RNA Pseudomonas fluorescens
Pseudomonas fluorescens		 unclassified source_name:cDNA prepared from succinate culture of Pf0-1 title:Pf0-1_5hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas fluorescens Pf0-1 chromosome (RefSeq: NC_007492) at 11-bp density. BPMAP files are provided as supplementary files. PFO1b520543F-3-REV.bpmap represents the forward strand of Pf0-1 chromosome, and PFO1b520543F-3-FWD.bpmap represents the reverse strand of Pf0-1 chromosome.
20 GSM973501 Pf0-1_7hr 0 The University of Tokyo 2012-07-25 [Tiling Array] Pseudomonas fluorescens Pf0-1 chromosome array (GPL8298) RNA Pseudomonas fluorescens
Pseudomonas fluorescens		 unclassified source_name:cDNA prepared from succinate culture of Pf0-1 title:Pf0-1_7hr description:This is an Affymetrix custom-commercial tiling array that covers thePseudomonas fluorescens Pf0-1 chromosome (RefSeq: NC_007492) at 11-bp density. BPMAP files are provided as supplementary files. PFO1b520543F-3-REV.bpmap represents the forward strand of Pf0-1 chromosome, and PFO1b520543F-3-FWD.bpmap represents the reverse strand of Pf0-1 chromosome.
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