Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Bacteria
(39,613)

Viruses
(1,263)

Phages
(101)

Unclassified
(5,497)

All
(931,947)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(51)

HT-Seq
(877)

Other
(57)

All
(39,613)

brain
(118)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(225)

unclassified
(36,795)

all
(39,613)

1 | 2 | 3 | 4 | 5 » [6]

	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM544836	Bf_MM_4.5mM_F_4	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Bryantella formatexigens DSM 14469) (GPL10433)	SRA	Marvinbryantia formatexigens DSM 14469	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose and Sodium Formate (4.5mM). Cells were harvested at A600= 0.25
2	GSM544844	Bf_MM_No_F_2	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Bryantella formatexigens DSM 14469) (GPL10433)	SRA	Marvinbryantia formatexigens DSM 14469	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose as the sole source of carbon (Sodium Formate was not added). Cells were harvested at A600= 0.25
3	GSM544846	Bf_MM_No_F_1	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Bryantella formatexigens DSM 14469) (GPL10433)	SRA	Marvinbryantia formatexigens DSM 14469	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose as the sole source of carbon (Sodium Formate was not added). Cells were harvested at A600= 0.25
4	GSM544862	Rh_N2_CO2_MA2_5	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose and Sodium Formate (4.5mM). Cells were harvested at A600= 0.25
5	GSM544879	Bf_MM_4.5mM_F_3	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Bryantella formatexigens DSM 14469) (GPL10433)	SRA	Marvinbryantia formatexigens DSM 14469	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose and Sodium Formate (4.5mM). Cells were harvested at A600= 0.25
6	GSM544881	Rh_N2_only_MA3_2	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle ; N2 in headspace), in MA3 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
7	GSM544884	Rh_N2_only_2	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle ; N2 in headspace), in MA3 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
8	GSM544885	Rh_H2_CO2_MA2_7	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle tubes; H2/CO2 in headspace), in MA2 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
9	GSM544890	Rh_H2_CO2_MA2_2	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle tubes; H2/CO2 in headspace), in MA2 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
10	GSM544897	Rh_N2_CO2_MA2_1	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle tubes; N2/CO2 in headspace), in MA2 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
11	GSM544901	Bf_MM_45mM_F_5	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Bryantella formatexigens DSM 14469) (GPL10433)	SRA	Marvinbryantia formatexigens DSM 14469	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose and Sodium Formate (45mM). Cells were harvested at A600= 0.25
12	GSM544907	Bf_MM_45mM_F_6	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Bryantella formatexigens DSM 14469) (GPL10433)	SRA	Marvinbryantia formatexigens DSM 14469	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose and Sodium Formate (45mM). Cells were harvested at A600= 0.25
13	GSM544920	Rh_N2_only_1	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle ; N2 in headspace), in MA3 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
14	GSM544925	Rh_H2_CO2_MA2_8	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle tubes; H2/CO2 in headspace), in MA2 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
15	GSM544928	Rh_N2_only_MA3_1	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle ; N2 in headspace), in MA3 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
16	GSM544930	Rh_H2_CO2_MA2_1	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle tubes; H2/CO2 in headspace), in MA2 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
17	GSM544932	Rh_N2_CO2_MA2_3	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle tubes; N2/CO2 in headspace), in MA2 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
18	GSM544948	Rh_N2_CO2_MA2_6	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Marvinbryantia formatexigens grown anaerobically (Balch tubes;N2/CO2 headspace), in defined minimal medium containing glucose and Sodium Formate (4.5mM). Cells were harvested at A600= 0.25
19	GSM544949	Rh_N2_only_MA3_3	0	Washington University in St. Louis	2010-05-19	[HT Sequencing] Illumina Genome Analyzer II (Blautia hydrogenotrophica DSM 10507) (GPL10436)	SRA	Blautia hydrogenotrophica DSM 10507	cerebrum	Blautia hydrogenotrophica grown anaerobically (125-ml serum bottle tubes; N2 in headspace), in MA3 medium containing 1% Glucose as a carbon source. Cells were harvested at A600~0.25
20	GSM262592	F5.D01.v2.110343	22,080	National Institute of Agricultural Biotechnology	2008-02-05	[Oligo Array] UCF BMS M. tuberculosis ver 2.0 (GPL4388)	RNA	Mycobacterium tuberculosis H37Rv	cerebrum	Multiple stress for 1 day Replicates; Biological (1/3) - Technical (1/4), Grown in rolling bottle, Replacing head space every other day with gas mixture (O2:CO2:N2 = 5:10:85).

1 | 2 | 3 | 4 | 5 » [6]