Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(7,355)		   Tiling Array
(676)		   cDNA Array
(10,532)		   Oligo Array
(19,682)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(51)		   HT-Seq
(729)		   Other
(57)		   All
(39,082)		  
  brain
(118)		   blood
(706)		   connective
(170)		   reproductive
(108)		   muscular
(90)		   digestive
(772)		   liver
(78)		   lung
(251)		   urinary
(19)		   endo/exo-crine
(204)		   embryo
(25)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(217)		   unclassified
(36,324)		   all
(39,082)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM605599 qRT-PCR on Staphylococcus aureus strain US300 in liver 2,647 J Craig Venter Institute 2010-10-06 [RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963) RNA Staphylococcus aureus
Staphylococcus aureus		 liver/hepato Staphylococcus aureus strain US300 during mouse liver infection
2 GSM605598 qRT-PCR on Staphylococcus aureus strain TB15 in liver 2,647 J Craig Venter Institute 2010-10-06 [RT-PCR] PFGRC Staphylococcus_aureus_full_genome_RT-PCR (GPL10963) RNA Staphylococcus aureus
Staphylococcus aureus		 liver/hepato Staphylococcus aureus strain TB15 during mouse liver infection
3 GSM467952 14028_liver_2D_IV_Nude_mouse1 17,328 Burnham Institute for Medical Research 2009-11-03 [cDNA Array] Salmonella enterica 17K STv7bSws_MMCC (GPL6868) RNA Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S		 liver/hepato Liver 2D IV Nude 14028 ON LB
4 GSM467947 14028_liver_2D_IV_Nude_mouse3 17,328 Burnham Institute for Medical Research 2009-11-03 [cDNA Array] Salmonella enterica 17K STv7bSws_MMCC (GPL6868) RNA Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S		 liver/hepato Liver 2D IV Nude 14028 ON LB
5 GSM467938 14028_liver_2D_IV_Nude_mouse2 17,328 Burnham Institute for Medical Research 2009-11-03 [cDNA Array] Salmonella enterica 17K STv7bSws_MMCC (GPL6868) RNA Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S		 liver/hepato Liver 2D IV Nude 14028 ON LB
6 GSM305609 Helicobacter hepaticus_wt versus fliA exp. 3 rep. 2 1,863 Hannover Medical School 2008-07-15 [Oligo Array] Ocimum Helicobacter hepaticus Array (GPL7051) RNA Helicobacter hepaticus
Helicobacter hepaticus		 liver/hepato Helicobacter hepaticus fliA mutant Helicobacter hepaticus wt bacteria
7 GSM305608 Helicobacter hepaticus_wt versus fliA exp. 3 rep. 1 1,863 Hannover Medical School 2008-07-15 [Oligo Array] Ocimum Helicobacter hepaticus Array (GPL7051) RNA Helicobacter hepaticus
Helicobacter hepaticus		 liver/hepato Helicobacter hepaticus wild type bacteria Helicobacter hepaticus fliA mutant
8 GSM305607 Helicobacter hepaticus_wt versus fliA exp. 2 rep. 2 1,863 Hannover Medical School 2008-07-15 [Oligo Array] Ocimum Helicobacter hepaticus Array (GPL7051) RNA Helicobacter hepaticus
Helicobacter hepaticus		 liver/hepato Helicobacter hepaticus wild type bacteria Helicobacter hepaticus fliA mutant
9 GSM305606 Helicobacter hepaticus_wt versus fliA exp. 2 rep. 1 1,863 Hannover Medical School 2008-07-15 [Oligo Array] Ocimum Helicobacter hepaticus Array (GPL7051) RNA Helicobacter hepaticus
Helicobacter hepaticus		 liver/hepato Helicobacter hepaticus fliA mutant Helicobacter hepaticus wild type bacteria
10 GSM305605 Helicobacter hepaticus_wt versus fliA exp. 1 rep. 2 1,863 Hannover Medical School 2008-07-15 [Oligo Array] Ocimum Helicobacter hepaticus Array (GPL7051) RNA Helicobacter hepaticus
Helicobacter hepaticus		 liver/hepato Helicobacter hepaticus fliA mutant Helicobacter hepaticus wt bacteria
11 GSM305604 Helicobacter hepaticus_wt versus fliA exp. 1 rep. 1 1,884 Hannover Medical School 2008-07-15 [Oligo Array] Ocimum Helicobacter hepaticus Array (GPL7051) RNA Helicobacter hepaticus
Helicobacter hepaticus		 liver/hepato Helicobacter hepaticus wild type bacteria Helicobacter hepaticus fliA mutant bacteria
12 GSM285247 Val 2_Liver_72H_REV 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition Validation pool 2 72h liver validation pool 2
13 GSM285246 Val 2_Liver_48H_REV 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition Validation pool 2 48h liver validation pool 2
14 GSM285240 Val 1_Liver_72H_REV 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition Validation pool 1 72h liver validation pool 1
15 GSM285239 Val 1_Liver_48H_REV 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition Validation pool 1 48h liver validation pool 1
16 GSM285213 Pool 11_Liver_72H_FORW 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition 288-11 72h liver 288-11
17 GSM285212 Pool 11_Liver_48H_FORW 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition 288-11 48h liver 288-11
18 GSM285211 Pool 10_Liver_72H_FORW 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition 288-10 72h liver 288-10
19 GSM285210 Pool 10_Liver_48H_FORW 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition 288-10 48h liver 288-10
20 GSM285209 Pool 9_Liver_48H_FORW 2,226 Fred Hutchinson CRC 2008-04-29 [Oligo Array] FHCRC-Francisella tularensis subsp. novicida-2K OligoArray Version 1 (GPL6795) genomic Francisella novicida
Francisella novicida		 liver/hepato Deposition 288-9 48h liver 288-9
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