Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(91)
  Primates
(0)
  Rodents
(49)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(22)
  Bacteria
(49)
  Viruses
(4)
  Phages
(0)
  Unclassified
(0)
  All
(289)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(2)
  cDNA Array
(13)
  Oligo Array
(32)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(49)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL17723 Salmonella Typhi 8X15K 15,744 Wellcome Trust Sanger Institute 2013-09-12 Agilent Salmonella enterica subsp. enterica serovar Typhi
Salmonella enterica subsp. enterica serovar Typhi
cDNA Array spotted DNA/cDNA, Salmonella Typhi 8X15K,
2 GPL17730 Salmonella Typhimurium 8 x 15 15,335 Wellcome Trust Sanger Institute 2013-09-13 Agilent Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
cDNA Array spotted DNA/cDNA, Salmonella Typhimurium 8 x 15,
3 GPL4484 Mitchell Group Streptococcus pneumoniae TIGR V.2 13,824 University of Glasgow 2006-10-25 The Institute for Genomic Research (TIGR) Streptococcus pneumoniae
Streptococcus pneumoniae
cDNA Array spotted DNA/cDNA, Mitchell Group Streptococcus pneumoniae TIGR V.2, The full genome array of S. pneumoniae microarray v.2 consists of amplicons representing segments of 2,131 open reading frames from S. pneumoniae reference strain TIGR4 (Tettelin et al., 2001) spotted in quadruplicate on glass slides. Also, the array contains an additional 118 open reading frames from strains R6 (164) (Hoskins et al., 2001) and G54 (399).
4 GPL2568 Sigma Genosys Panorama Escherichia coli Gene Array 9,216 Plymouth Marine Laboratory 2005-06-23 Sigma Genosys Escherichia coli
Escherichia coli
cDNA Array spotted DNA/cDNA, Sigma Genosys Panorama Escherichia coli Gene Array,
5 GPL13609 SALSA 2 IFR Salmonella 8K Arrays 8,064 Institute of Food Research 2011-05-18 Institute of Food research, Norwich, UK Salmonella typhimurium DT104,Salmonella enterica subsp. enterica serovar Typhimurium str. LT2,Salmonella enterica subsp. enterica serovar Enteritidis,Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344,Salmonella enterica subsp. enterica s
Salmonella typhimurium DT104,Salmonella enterica subsp. enterica serovar Typhimurium str. LT2,Salmonella enterica subsp. enterica serovar Enteritidis,Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344,Salmonella enterica subsp. enterica s
cDNA Array spotted DNA/cDNA, SALSA 2 IFR Salmonella 8K Arrays,
6 GPL8232 IFR ShEcoli 7.6k v1.0 7,680 Institute of Food Research 2009-02-26 Institute of Food Research, Norwich, UK Escherichia coli,Shigella flexneri
Escherichia coli,Shigella flexneri
cDNA Array spotted DNA/cDNA, IFR ShEcoli 7.6k v1.0,
7 GPL5780 IFR_Salmonella_7.3k_v1.0 7,296 Institute of Food Research 2007-08-28 Institute of Food Research, Norwich, UK Salmonella enterica
Salmonella enterica
cDNA Array spotted DNA/cDNA, IFR_Salmonella_7.3k_v1.0,
8 GPL3586 Institute of Food Research Salmonella typhimurium LT2 6k array 6,144 Institute of Food Research 2006-03-24 Institute of Food Research, Norwich, UK Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
cDNA Array spotted DNA/cDNA, Institute of Food Research Salmonella typhimurium LT2 6k array,
9 GPL10431 IFR_Salmonella_5.6k_v1.0 5,569 University of Sheffield 2010-05-19 Institute of Food Research, Norwich, UK Salmonella typhimurium DT104,Salmonella enterica subsp. enterica serovar Typhimurium str. LT2,Salmonella enterica subsp. enterica serovar Enteritidis,Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Salmonella typhimurium DT104,Salmonella enterica subsp. enterica serovar Typhimurium str. LT2,Salmonella enterica subsp. enterica serovar Enteritidis,Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
cDNA Array spotted DNA/cDNA, IFR_Salmonella_5.6k_v1.0,
10 GPL3612 Institute of Food Research Salmonella typhimurium LT2 5.8K array 5,376 Institute of Food Research 2006-03-31 Institute of Food Research, Norwich, UK Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
cDNA Array spotted DNA/cDNA, Institute of Food Research Salmonella typhimurium LT2 5.8K array,
11 GPL8849 IFR_Salmonella_5.3k_v1.0 5,376 Institute of Food Research 2009-07-13 Institute of Food Research, Norwich, UK Salmonella enterica
Salmonella enterica
cDNA Array spotted DNA/cDNA, IFR_Salmonella_5.3k_v1.0,
12 GPL9091 IFR_Salmonella_5.3k_v1.1 5,376 Institute of Food Research 2009-08-24 Institute of Food Research, Norwich, UK Salmonella enterica
Salmonella enterica
cDNA Array spotted DNA/cDNA, IFR_Salmonella_5.3k_v1.1,
13 GPL10020 Roseburia inulinivorans 5K array 4,992 University of Aberdeen 2010-02-08 Rowett Institute of Nutrition and Health Roseburia inulinivorans
Roseburia inulinivorans
cDNA Array spotted DNA/cDNA, Roseburia inulinivorans 5K array, The array has been printed in 48 blocks (4 columns and 12 rows), each block contains 324 features; 18 columns with 6 rows in triplicate at 0.20mm spacing. Mixed Arabidopsis thaliana cDNAs have been printed as landmarks in the top left corners of blocks 1,1; 1,4; 4,1; 4,4; 5,1; 5,4; 8,1; 8,4; 9,1; 9,4; 12,1 and 12,4.