Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(765)		   Primates
(7)		   Rodents
(755)		   Mammals
(22)		   Vertebrates
(41)		   Invertebrates
(86)		   Plants
(460)		   Bacteria
(149)		   Viruses
(1)		   Phages
(0)		   Unclassified
(6)		   All
(2,292)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(88)		   Tiling Array
(12)		   cDNA Array
(12)		   Oligo Array
(34)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(3)		   Other
(0)		   All
(149)		  
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genomic comparison in Vibrio parahaemolyticus strains by comparative genomic hybridization. (GSE10020) [cDNA Array] Vibrio parahaemolyticus RIMD2210633 5k microarray (GPL6058) Osaka University 2007-12-24 Vibrio parahaemolyticus
Vibrio parahaemolyticus		 321,156
(4,866 x 66) 		66 by_platform
by_series
2 Examination of gene expression levels in mutants of phytochrome-related protain (GSE5391) [cDNA Array] TakaraBio CyanoCHIP ver1.4-ver1.6 (GPL4017) University of Tokyo 2006-07-25 Synechocystis sp. PCC 6803
Synechocystis sp. PCC 6803		 152,448
(6,352 x 24) 		24 by_platform
by_series
3 Examination of growth mode dependent replication dynamics and expression levels for Vibrio parahaemolyticus RIMD2210633. (GSE9968) [cDNA Array] Vibrio parahaemolyticus RIMD2210633 5k microarray (GPL6058) Osaka University 2007-12-19 Vibrio parahaemolyticus
Vibrio parahaemolyticus		 38,928
(4,866 x 8) 		8 by_platform
by_series
4 RIMD 2210633 wild type versus vtrA or vtrB mutants (GSE17242) [cDNA Array] Vibrio parahaemolyticus RIMD2210633 5k microarray (GPL6058) OSAKA university 2009-07-21 Vibrio parahaemolyticus
Vibrio parahaemolyticus		 29,196
(4,866 x 6) 		6 by_platform
by_series
5 Vibrio parahaemolyticus gene expression affected by 0.04% bile (GSE21666) [cDNA Array] Vibrio parahaemolyticus RIMD2210633 5k microarray (GPL6058) OSAKA university 2010-05-04 Vibrio parahaemolyticus
Vibrio parahaemolyticus		 29,196
(4,866 x 6) 		6 by_platform
by_series
6 Chip-chip from C. glutamicum wild type expressing GlxR tagged with Strep Tag II and cyaB deletion strain expressing GlxR tagged with Strep Tag II. (GSE26870) [cDNA Array] RITEmmg_Cglutamicum_3K_ver.1.0 (GPL11651) Research institute of Innovative Technology for the Earth (RITE) 2011-01-26 Corynebacterium glutamicum
Corynebacterium glutamicum		 25,200
(3,600 x 7) 		7 by_platform
by_series
7 Comparison between GT and SigE overexpressed strains of cyanobacteria (GSE27406) [cDNA Array] CyanoChip Ver.1.6 (Takara bio.) (GPL13193) RIKEN 2011-02-18 Cyanobacteria
Cyanobacteria		 18,444
(3,074 x 6) 		6 by_platform
by_series
8 Effect of VirR/VirS-VR-RNA regulatory cascade on the expression of chromosomal genes of Clostridium perfringens (GSE12833) [cDNA Array] Kyushu University Clostridium perfringens strain 13 DNA 27K microarray version 1 (GPL7332) Kyushu University 2008-09-18 Clostridium perfringens str. 13
Clostridium perfringens str. 13		 15,960
(2,660 x 6) 		6 by_platform
by_series
9 Effect of virX regulator on the expression of chromosomal genes of Clostridium perfringens (GSE37998) [cDNA Array] Kyushu University Clostridium perfringens strain 13 DNA 27K microarray version 1 (GPL7332) Kanazawa University 2012-05-16 Clostridium perfringens str. 13
Clostridium perfringens str. 13		 10,640
(2,660 x 4) 		4 by_platform
by_series
10 Transcriptional changes of phytoplasma under host switching between plant and insect (GSE30804) [cDNA Array] Phytoplasma asteris OY-M DNA array (GPL13531) The University of Tokyo 2011-07-20 Candidatus Phytoplasma asteris
Candidatus Phytoplasma asteris		 7,434
(531 x 14) 		14 by_platform
by_series
11 phytoplasma in plants vs. phytoplasma in insects (single hyb expts) (GSE29274) [cDNA Array] Phytoplasma asteris OY-M DNA array (GPL13531) The University of Tokyo 2011-05-13 Candidatus Phytoplasma asteris
Candidatus Phytoplasma asteris		 4,248
(531 x 8) 		8 by_platform
by_series
12 phytoplasma in plants vs. phytoplasma in insects (co-hybridizations) (GSE30302) [cDNA Array] Phytoplasma asteris OY-M DNA array (GPL13531) The University of Tokyo 2011-06-29 Candidatus Phytoplasma asteris
Candidatus Phytoplasma asteris		 3,186
(531 x 6) 		6 by_platform
by_series
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