Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(4,914)
  Primates
(0)
  Rodents
(669)
  Mammals
(56)
  Vertebrates
(532)
  Invertebrates
(41)
  Plants
(101)
  Bacteria
(132)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(6,530)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(20)
  cDNA Array
(34)
  Oligo Array
(78)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(132)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(34)
  all
(34)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM175469 SA_acidshock_5min_replicate3 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_5min_replicate3 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
2 GSM175468 SA_acidshock_5min_replicate2 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_5min_replicate2 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
3 GSM175467 SA_acidshock_5min_replicate1 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_5min_replicate1 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
4 GSM175466 SA_acidshock_2min_replicate3 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_2min_replicate3 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
5 GSM175475 SA_acidshock_20min_replicate3 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_20min_replicate3 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
6 GSM175474 SA_acidshock_20min_replicate2 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_20min_replicate2 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
7 GSM175473 SA_acidshock_20min_replicate1 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_20min_replicate1 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
8 GSM175472 SA_acidshock_10min_replicate3 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_10min_replicate3 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
9 GSM175471 SA_acidshock_10min_replicate2 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_10min_replicate2 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
10 GSM175470 SA_acidshock_10min_replicate1 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acidshock_10min_replicate1 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
11 GSM175465 SA_acid shock_2min_replicate2 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acid shock_2min_replicate2 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
12 GSM175464 SA_acid shock_2min_replicate1 2,323 Matforsk, Norwegian Food Research Institute 2007-03-15 [cDNA Array] TIGR Staphylococcus aureus version 1 array (GPL4996) RNA Staphylococcus aureus
Staphylococcus aureus
unclassified source_name:Staphylococcus aureus treated Staphylococcus aureus control title:SA_acid shock_2min_replicate1 description:All genes are spotted in triplicate on the slides to increase accuracy of the measured intensities.
13 GSM153894 E.coli_control_replicate3 4,290 Matforsk, Norwegian Food Research Institute 2007-01-04 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli control title:E.coli_control_replicate3 description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
14 GSM154804 E.coli_control_replicate2B 4,290 Matforsk, Norwegian Food Research Institute 2007-01-11 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli control title:E.coli_control_replicate2B description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
15 GSM154803 E.coli_control_replicate2A 4,290 Matforsk, Norwegian Food Research Institute 2007-01-11 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli control title:E.coli_control_replicate2A description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
16 GSM154802 E.coli_control_replicate1B 4,290 Matforsk, Norwegian Food Research Institute 2007-01-11 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli control title:E.coli_control_replicate1B description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
17 GSM154801 E.coli_control_replicate1A 4,290 Matforsk, Norwegian Food Research Institute 2007-01-11 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli control title:E.coli_control_replicate1A description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
18 GSM154825 E.coli_BCadapted3_replicate3_50ppmBC 4,290 Matforsk, Norwegian Food Research Institute 2007-01-11 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli adapted in benzalkonium chloride title:E.coli_BCadapted3_replicate3_50ppmBC description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
19 GSM154813 E.coli_BCadapted3_replicate3 4,290 Matforsk, Norwegian Food Research Institute 2007-01-11 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli adapted in benzalkonium chloride title:E.coli_BCadapted3_replicate3 description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
20 GSM154821 E.coli_BCadapted3_replicate2_50ppmBC 4,290 Matforsk, Norwegian Food Research Institute 2007-01-11 [cDNA Array] Sigma Genosys Panorama Escherichia coli Gene Array (GPL189) RNA Escherichia coli
Escherichia coli
unclassified source_name:E. coli adapted in benzalkonium chloride title:E.coli_BCadapted3_replicate2_50ppmBC description:The arrays were stripped between hybridisations according to the PanoramaTM E. coli gene arrays technical protocol (Sigma Genosys).
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