Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(78)
  SAGE RsaI
(0)
  SAGE Sau3A
(5)
  MPSS
(2)
  GeneChip
(8,352)
  Tiling Array
(1,621)
  cDNA Array
(1,937)
  Oligo Array
(5,065)
  Bead Array
(2,741)
  Protein Array
(0)
  Antibody
(38)
  RT-PCR
(205)
  HT-Seq
(1,977)
  Other
(117)
  All
(22,139)
 
1   |   2   |   3   |   4   |   5      »      [138]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genome-wide survey of large rare copy number variations in Alzheimer’s disease among Caribbean Hispanics (GSE33528) [Bead Array] Illumina HumanHap650Yv2 Genotyping BeadChip (HumanHap650Y_v2-0_GenotypingBC_11237679_A) (GPL14932) Tanz Centre for Neurodegenerative Diseases 2011-11-07 Homo sapiens
Homo sapiens
805,351,815
(662,841 x 1,215)
1,215 by_platform
by_series
2 Genomic landscape of copy number aberrations enables the identification of oncogenic drivers in hepatocellular carcinoma (GSE38326) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) Pfizer 2012-05-30 Homo sapiens
Homo sapiens
686,532,238
(1,140,419 x 602)
316 286 by_platform
by_series
3 Genomic landscape of copy number aberrations enables the identification of oncogenic drivers in hepatocellular carcinoma [tumor] (GSE38323) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) Pfizer 2012-05-30 Homo sapiens
Homo sapiens
652,319,668
(1,140,419 x 572)
286 286 by_platform
by_series
4 Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia (GSE49031) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) Uppsala University 2013-07-18 Homo sapiens
Homo sapiens
458,870,265
(485,577 x 945)
879 6 38 22 by_platform
by_series
5 Genome-wide signatures of differential DNA methylation and gene expression in pediatric ALL (GSE49032) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) Uppsala University 2013-07-18 Homo sapiens
Homo sapiens
458,870,265
(485,577 x 945)
879 6 38 22 by_platform
by_series
6 EPIC-Italy at HuGeF (GSE51032) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) Imperial College London 2013-09-20 Homo sapiens
Homo sapiens
410,312,565
(485,577 x 845)
845 by_platform
by_series
7 Dynamic Changes in the Copy Number of Pluripotency and Cell Proliferation Genes in Human ES and iPS Cells during Reprogramming and Time in Culture (GSE25925) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) THE SCRIPPS RESEARCH INSTITUTE 2010-12-08 Homo sapiens
Homo sapiens
369,495,756
(1,140,419 x 324)
29 24 84 2 13 5 2 4 8 6 9 138 by_platform
by_series
8 A data-driven approach to preprocessing Illumina 450K methylation array data (GSE43414) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) King's College London 2013-01-10 Homo sapiens
Homo sapiens
337,961,592
(485,577 x 696)
601 95 by_platform
by_series
9 Differential DNA methylation in Rheumatoid arthritis (GSE42861) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) Johns Hopkins University School of Medicine 2012-12-12 Homo sapiens
Homo sapiens
334,562,553
(485,577 x 689)
1 1 687 by_platform
by_series
10 Genome-wide Methylation Profiles Reveal Quantitative Views of Human Aging Rates (GSE40279) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) Sage Bionetworks 2012-08-21 Homo sapiens
Homo sapiens
318,538,512
(485,577 x 656)
656 by_platform
by_series
11 Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage (GSE33522) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) Genome Institute of Singapore 2011-11-07 Homo sapiens
Homo sapiens
299,930,197
(1,140,419 x 263)
1 262 by_platform
by_series
12 Hepatocellular Carcinoma Differential Network (SNP profiling of tumor and non-tumor tissue) (GSE28127) [Bead Array] Illumina HumanHap650Yv3 Genotyping BeadChip (HumanHap650Yv3_A) (GPL6987) Merck 2011-03-23 Homo sapiens
Homo sapiens
265,028,118
(660,918 x 401)
401 by_platform
by_series
13 The Genome Wide Structure of the Jewish People (GSE21478) [Bead Array] Illumina Human610-Quad v1.0 BeadChip (GPL8887) Estonian Biocentre 2010-04-22 Homo sapiens
Homo sapiens
236,563,281
(620,901 x 381)
381 by_platform
by_series
14 The effect of genotype and in utero environment on inter-individual variation in neonate DNA methylomes (GSE54445) [Bead Array] Infinium HumanOmniExpressExome BeadChip (GPL18224) Singapore Institute for Clinical Sciences 2014-01-27 Homo sapiens
Homo sapiens
227,088,186
(958,178 x 237)
237 by_platform
by_series
15 The effect of genotype and in utero environment on inter-individual variation in neonate DNA methylomes (GSE54446) [Bead Array] Infinium HumanOmniExpressExome BeadChip (GPL18224) Singapore Institute for Clinical Sciences 2014-01-27 Homo sapiens
Homo sapiens
227,088,186
(958,178 x 237)
237 by_platform
by_series
16 Genome-wide characterization of allelic chromatin in human fibroblast and lymphoblastoid cell lines by high-density allele-specific analyses (GSE51272) [Bead Array] Illumina HumanOmni2.5-Quad BeadChip (GPL13314) McGill University 2013-09-30 Homo sapiens
Homo sapiens
220,500,000
(2,450,000 x 90)
90 by_platform
by_series
17 The CURELUNG Project from the Epigenetics Side (Patients dataset) (GSE39279) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) IDIBELL 2012-07-11 Homo sapiens
Homo sapiens
215,596,188
(485,577 x 444)
444 by_platform
by_series
18 Genotyping in Neuroblastoma Primary tumors (GSE19385) [Bead Array] Illumina HumanHap550 Genotyping BeadChip v1 (GPL6433) Childrens Hospital of Philadelphia 2009-12-08 Homo sapiens
Homo sapiens
211,033,760
(555,352 x 380)
380 by_platform
by_series
19 The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts [genotyping] (GSE52442) [Bead Array] Illumina Human1M-Duov3 DNA Analysis BeadChip (Human1M-Duov3_B) (GPL6984) McGill University and Génome Québec Innovation Centre 2013-11-16 Homo sapiens
Homo sapiens
208,658,538
(1,199,187 x 174)
174 by_platform
by_series
20 The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts (GSE53261) [Bead Array] Illumina Human1M-Duov3 DNA Analysis BeadChip (Human1M-Duov3_B) (GPL6984) McGill University 2013-12-12 Homo sapiens
Homo sapiens
208,658,538
(1,199,187 x 174)
174 by_platform
by_series
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