Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page

An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Human (3,705)   Primates (37)   Rodents (1,748)   Mammals (295)   Vertebrates (402)   Invertebrates (1,004)   Plants (2,170)   Bacteria (1,636)   Viruses (78)   Phages (8)   Unclassified (399)   All (11,528)

SAGE NlaIII (5)   SAGE RsaI (0)   SAGE Sau3A (1)   MPSS (2)   GeneChip (310)   Tiling Array (0)   cDNA Array (0)   Oligo Array (0)   Bead Array (119)   Protein Array (1)   Antibody (20)   RT-PCR (82)   HT-Seq (0)   Other (36)   All (3,705)   1   |   2   |   3   |   4   |   5      »      [6] Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification Keywords used for the classification are shown with bold font. 1 GPL13314 Illumina HumanOmni2.5-Quad BeadChip 2,450,000 NCBI/NLM/NIH 2011-03-22 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanOmni2.5-Quad BeadChip, common and rare SNP content from the 1kGP (MAF>2.5%) for diverse world populations build: hg18 =optimized tag SNP content from recently released 1000 Genomes Project pilot data 2 GPL16110 Illumina HumanOmni2.5 BeadChip (hg19) 2,443,179 Mount Sinai Hospital 2012-09-27 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanOmni2.5 BeadChip (hg19), build: hg19 3 GPL16104 Illumina HumanOmni2.5-8 BeadChip 2,379,855 NCBI/NLM/NIH 2012-09-25 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanOmni2.5-8 BeadChip, This array is based on build 37 4 GPL16107 Illumina HumanOmni2.5-4v1_B BeadChip [hg19] 2,303,277 Genentech, Inc. 2012-09-26 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanOmni2.5-4v1_B BeadChip [hg19], Please see http://www.illumina.com/technology/infinium_hd_assay.ilmn 5 GPL16573 Illumina HumanOmni1-Quad BeadChip (15004098) 1,216,822 Research Institute of Physico-Chemical Medicine 2013-01-30 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanOmni1-Quad BeadChip (15004098), includes > 72,000 CPGs (probes that start with kgp) from the 1000 Genomes Project that are not in dbSNP as of 01/30/2013, catalog # 15004098 6 GPL6984 Illumina Human1M-Duov3 DNA Analysis BeadChip (Human1M-Duov3_B) 1,199,187 Illumina Inc. 2008-06-20 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina Human1M-Duov3 DNA Analysis BeadChip (Human1M-Duov3_B), over one million markers to interrogate human genetic variation using single nucleotide polymorphisms (SNPs) and copy number variation (CNV) probes 7 GPL8882 Illumina HumanOmni1-Quad BeadChip 1,140,419 NCBI/NLM/NIH 2009-07-19 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanOmni1-Quad BeadChip, 8 GPL9969 Illumina HumanOmni1 Genotyping BeadChip 1,140,419 CNIO 2010-01-25 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanOmni1 Genotyping BeadChip, 9 GPL6983 Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) 1,072,820 Illumina Inc. 2008-06-20 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C), over one million markers to interrogate human genetic variation using single nucleotide polymorphisms (SNPs) and copy number variation (CNV) probes 10 GPL16333 Infinium HumanOmniExpressExome BeadChip 951,117 NCBI/NLM/NIH 2012-11-28 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Infinium HumanOmniExpressExome BeadChip, 11 GPL13135 HumanOmniExpress BeadChip 733,202 NCBI/NLM/NIH 2011-02-08 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, HumanOmniExpress BeadChip, 12 GPL14932 Illumina HumanHap650Yv2 Genotyping BeadChip (HumanHap650Y_v2-0_GenotypingBC_11237679_A) 662,841 Tanz Centre for Neurodegenerative Diseases 2011-11-26 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanHap650Yv2 Genotyping BeadChip (HumanHap650Y_v2-0_GenotypingBC_11237679_A), Descriptor File Name(s),HumanHap650Y_v2-0_GenotypingBC_11237679_A.bpm Assay Format,Infinium II SNP Count,662841 13 GPL6987 Illumina HumanHap650Yv3 Genotyping BeadChip (HumanHap650Yv3_A) 660,918 Illumina Inc. 2008-06-20 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanHap650Yv3 Genotyping BeadChip (HumanHap650Yv3_A), over 655,000 tag SNP markers derived from the International HapMap Project 14 GPL8888 Illumina Human660W-Quad v1.0 BeadChip 657,366 NCBI/NLM/NIH 2009-07-20 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina Human660W-Quad v1.0 BeadChip, 15 GPL8887 Illumina Human610-Quad v1.0 BeadChip 620,901 NCBI/NLM/NIH 2009-07-20 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina Human610-Quad v1.0 BeadChip, 16 GPL6434 Illumina HumanHap550 Genotyping BeadChip v3 561,466 NCBI/NLM/NIH 2008-01-29 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanHap550 Genotyping BeadChip v3, Version 3, Illumina Sentrix HumanHap550 Genotyping BeadChip 17 GPL6981 Illumina HumanHap550v3 Genotyping BeadChip (HumanHap550v3_B) 561,466 Illumina Inc. 2008-06-20 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanHap550v3 Genotyping BeadChip (HumanHap550v3_B), over 555,000 tag SNP markers derived from the International HapMap Project 18 GPL6982 Illumina HumanHap550-Duov3 Genotyping BeadChip (HumanHap550-2v3_B) 561,466 Illumina Inc. 2008-06-20 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanHap550-Duov3 Genotyping BeadChip (HumanHap550-2v3_B), over 555,000 tag SNP markers derived from the International HapMap Project 19 GPL6433 Illumina HumanHap550 Genotyping BeadChip v1 555,352 NCBI/NLM/NIH 2008-01-29 Illumina, Inc. Homo sapiens Bead Array oligonucleotide beads, Illumina HumanHap550 Genotyping BeadChip v1, Version 1, Illumina Sentrix HumaHap550 Genotyping BeadChip 20 GPL6975 KKI/Pevsnerlab Human 550K SNP 555,352 Kennedy Krieger Institute 2008-06-19 Illumina Homo sapiens Bead Array oligonucleotide beads, KKI/Pevsnerlab Human 550K SNP, Illumina’s HumanHap550 Genotyping BeadChip enables whole-genome genotyping of over 555,000 tag SNP markers derived from the International HapMap Project (www.hapmap.org). The HumanHap550 Genotyping BeadChip contains > 555,000 SNP loci with high-density tag SNP content that provides comprehensive genomic coverage across multiple populations. In addition, there are 4,300 SNPs in recently reported copy number polymorphism regions of the genome, 7,800 nsSNPs, 1,800 tag SNPs in the Major Histocompatibility Complex (MHC), 177 mitochondrial SNPs, and 11 Y-chromosome SNPs. (Source: http://www.illumina.com/pages.ilmn?ID=154) 1   |   2   |   3   |   4   |   5      »      [6]