Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(35)
  Primates
(0)
  Rodents
(23)
  Mammals
(1)
  Vertebrates
(4)
  Invertebrates
(3)
  Plants
(49)
  Bacteria
(1)
  Viruses
(0)
  Phages
(0)
  Unclassified
(3)
  All
(119)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2)
  Tiling Array
(3)
  cDNA Array
(11)
  Oligo Array
(18)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(35)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL6732 Affymetrix GeneChip Human Genome U133 Plus 2.0 Array based on a custom CDF (REFSEQ_7) 26,714 Karolinska Institutet 2008-04-11 Affymetrix Homo sapiens
Homo sapiens
GeneChip in situ oligonucleotide, Affymetrix GeneChip Human Genome U133 Plus 2.0 Array based on a custom CDF (REFSEQ_7), This identical to GPL570 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below. We used the REFSEQ7 version for HGU-133_plus2
2 GPL4454 Affymetrix GeneChip Human Genome U133 Plus 2.0 Array based on a custom CDF 23,597 Karolinska Institutet 2006-10-16 Affymetrix Homo sapiens
Homo sapiens
GeneChip in situ oligonucleotide, Affymetrix GeneChip Human Genome U133 Plus 2.0 Array based on a custom CDF, This identical to GPL570 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below. We used the REFSEQ6 version for HGU-133_plus2