Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(761)
  SAGE RsaI
(0)
  SAGE Sau3A
(15)
  MPSS
(35)
  GeneChip
(271,803)
  Tiling Array
(10,338)
  cDNA Array
(42,030)
  Oligo Array
(126,686)
  Bead Array
(121,967)
  Protein Array
(0)
  Antibody
(1,259)
  RT-PCR
(5,179)
  HT-Seq
(23,398)
  Other
(12,262)
  All
(615,734)
 
  brain
(18,660)
  blood
(77,456)
  connective
(17,548)
  reproductive
(13,419)
  muscular
(6,338)
  digestive
(12,134)
  liver
(6,394)
  lung
(14,057)
  urinary
(8,583)
  endo/exo-crine
(26,194)
  embryo
(1,846)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(19,066)
  unclassified
(50,108)
  all
(271,803)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM344429 ZR7530_xba 58,960 Genentech, Inc. 2008-11-20 [GeneChip] [Mapping50K_Xba240] Affymetrix Human Mapping 50K Xba240 SNP Array (GPL2005) genomic Homo sapiens
Homo sapiens
breast Neoplastic breast tissue
2 GSM344379 ZR7530_hind 57,243 Genentech, Inc. 2008-11-20 [GeneChip] [Mapping50K_Hind240] Affymetrix Human Mapping 50K Hind240 SNP Array (GPL2004) genomic Homo sapiens
Homo sapiens
breast Neoplastic breast tissue
3 GSM844726 ZR7530, gene expression array U133Plus2 PFIZER 54,675 Pfizer, Inc. 2011-12-06 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR7530
4 GSM844727 ZR7530, gene expression array U133Plus2 Good_BREAST_WYETH 54,675 Pfizer, Inc. 2011-12-06 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR7530
5 GSM847510 ZR7530, copy number variation SNP6.0 WYETH_BREAST replicate 1,877,772 Pfizer, Inc. 2011-12-09 [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) genomic Homo sapiens
Homo sapiens
breast ZR7530
6 GSM847450 ZR7530, copy number variation SNP6.0 WYETH_BREAST 1,877,772 Pfizer, Inc. 2011-12-09 [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) genomic Homo sapiens
Homo sapiens
breast ZR7530
7 GSM530555 ZR7530 54,675 UCLA 2010-04-06 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR7530
8 GSM344410 ZR751_xba 58,960 Genentech, Inc. 2008-11-20 [GeneChip] [Mapping50K_Xba240] Affymetrix Human Mapping 50K Xba240 SNP Array (GPL2005) genomic Homo sapiens
Homo sapiens
breast Neoplastic breast tissue
9 GSM388197 ZR751_untreated 54,675 Institute for Molecular Medicine, University of Helsinki 2009-03-31 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR751
10 GSM344360 ZR751_hind 57,243 Genentech, Inc. 2008-11-20 [GeneChip] [Mapping50K_Hind240] Affymetrix Human Mapping 50K Hind240 SNP Array (GPL2004) genomic Homo sapiens
Homo sapiens
breast Neoplastic breast tissue
11 GSM388198 ZR751_emetine_10h 54,675 Institute for Molecular Medicine, University of Helsinki 2009-03-31 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR751
12 GSM844725 ZR751, gene expression array U133Plus2 54,675 Pfizer, Inc. 2011-12-06 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR751
13 GSM847509 ZR751, copy number variation SNP6.0 WYETH_BREAST replicate 1,877,772 Pfizer, Inc. 2011-12-09 [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) genomic Homo sapiens
Homo sapiens
breast ZR751
14 GSM847449 ZR751, copy number variation SNP6.0 WYETH_BREAST 1,877,772 Pfizer, Inc. 2011-12-09 [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) genomic Homo sapiens
Homo sapiens
breast ZR751
15 GSM845400 ZR751, copy number variation SNP6.0 1,877,772 Pfizer, Inc. 2011-12-07 [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) genomic Homo sapiens
Homo sapiens
breast ZR751
16 GSM530554 ZR751 54,675 UCLA 2010-04-06 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR751
17 GSM419295 ZR75-30 287,329 Erasmuc Medical Centre 2009-06-20 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
breast Breast cancer cell lines
18 GSM490054 ZR75-1/LTED, rep 3 54,675 Vanderbilt Univ 2009-12-23 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR75-1/LTED cells
19 GSM490053 ZR75-1/LTED, rep 2 54,675 Vanderbilt Univ 2009-12-23 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR75-1/LTED cells
20 GSM490052 ZR75-1/LTED, rep 1 54,675 Vanderbilt Univ 2009-12-23 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
breast ZR75-1/LTED cells
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