Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,806)		   Primates
(64)		   Rodents
(344)		   Mammals
(0)		   Vertebrates
(4)		   Invertebrates
(95)		   Plants
(130)		   Bacteria
(477)		   Viruses
(0)		   Phages
(0)		   Unclassified
(9)		   All
(3,929)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(948)		   Tiling Array
(79)		   cDNA Array
(9)		   Oligo Array
(556)		   Bead Array
(1,104)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(54)		   HT-Seq
(56)		   Other
(0)		   All
(2,806)		  
  brain
(0)		   blood
(20)		   connective
(0)		   reproductive
(14)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(2)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(20)		   all
(56)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM445803 Cord blood CD4+_0h 0 University of Turku 2009-08-27 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood human cord blood CD4+ cell, 0h
2 GSM445804 Cord blood CD4+_Act_1h 0 University of Turku 2009-08-27 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood human cord blood CD4+ cell, activated, 1h
3 GSM445805 Cord blood CD4+_Act+IL-4_1h 0 University of Turku 2009-08-27 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood human cord blood CD4+ cell, activated and IL-4 treated, 1h
4 GSM445806 Cord blood CD4+_Act_4h 0 University of Turku 2009-08-27 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood human cord blood CD4+ cell, activated, 4h
5 GSM445807 Cord blood CD4+_Act+IL-4_4h 0 University of Turku 2009-08-27 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood human cord blood CD4+ cell, activated and IL-4 treated, 4h
6 GSM678267 IgG control 0 University of Eastern Finland 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood THP-1 cells
7 GSM678268 VDR ChIP-seq unstimulated 0 University of Eastern Finland 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood THP-1 cells
8 GSM678269 VDR ChIP-seq calcitriol 0 University of Eastern Finland 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood THP-1 cells
9 GSM700468 IgG control 0 University of Eastern Finland 2011-04-01 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood THP-1 cells
10 GSM700469 LXR ChIP-seq vehicle treated 0 University of Eastern Finland 2011-04-01 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood THP-1 cells
11 GSM700470 LXR ChIP-seq T09 treated 0 University of Eastern Finland 2011-04-01 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 peripheral blood THP-1 cells
12 GSM759657 AR_ChIP-seq_rep1 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:AR_ChIP-seq title:AR_ChIP-seq_rep1 description:Chromatin IP against AR in parental cells
13 GSM759658 AR_ChIP-seq_rep2 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:AR_ChIP-seq title:AR_ChIP-seq_rep2 description:Chromatin IP against AR in parental cells
14 GSM759659 AR_ChIP-seq_siFoxA1_rep1 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:AR_ChIP-seq_siFoxA1 title:AR_ChIP-seq_siFoxA1_rep1 description:Chromatin IP against AR in siFoxA1 cells
15 GSM759660 AR_ChIP-seq_siFoxA1_rep2 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:AR_ChIP-seq_siFoxA1 title:AR_ChIP-seq_siFoxA1_rep2 description:Chromatin IP against AR in siFoxA1 cells
16 GSM759661 FoxA1_ChIP-seq_rep1 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:FoxA1_ChIP-seq title:FoxA1_ChIP-seq_rep1 description:Chromatin IP against FoxA1 in parental cells
17 GSM759662 FoxA1_ChIP-seq_rep2 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:FoxA1_ChIP-seq title:FoxA1_ChIP-seq_rep2 description:Chromatin IP against FoxA1 in parental cells
18 GSM759663 FoxA1_ChIP-seq_siFoxA1_rep1 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:FoxA1_ChIP-seq_siFoxA1 title:FoxA1_ChIP-seq_siFoxA1_rep1 description:Chromatin IP against FoxA1 in siFoxA1 cells
19 GSM759664 FoxA1_ChIP-seq_siFoxA1_rep2 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:FoxA1_ChIP-seq_siFoxA1 title:FoxA1_ChIP-seq_siFoxA1_rep2 description:Chromatin IP against FoxA1 in siFoxA1 cells
20 GSM759665 H3K4me2_ChIP-seq 0 University of Helsinki 2011-07-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:H3K4me2_ChIP-seq title:H3K4me2_ChIP-seq description:Chromatin IP against H3K4me2 in parental cells
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