Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,356)		   Primates
(665)		   Rodents
(7,771)		   Mammals
(399)		   Vertebrates
(703)		   Invertebrates
(1,567)		   Plants
(3,435)		   Bacteria
(998)		   Viruses
(14)		   Phages
(0)		   Unclassified
(76)		   All
(33,004)		  
  SAGE NlaIII
(3)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(8,930)		   Tiling Array
(152)		   cDNA Array
(493)		   Oligo Array
(3,351)		   Bead Array
(4,250)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(65)		   HT-Seq
(102)		   Other
(10)		   All
(17,356)		  
  brain
(0)		   blood
(38)		   connective
(13)		   reproductive
(26)		   muscular
(0)		   digestive
(5)		   liver
(0)		   lung
(1)		   urinary
(3)		   endo/exo-crine
(2)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(14)		   all
(102)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM416753 HeLa 1,193,225 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 skin HeLa
2 GSM416756 A549 796,698 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 lung A549
3 GSM416760 MCF7 776,046 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 breast MCF7
4 GSM402329 MCF7_smallRNAseq 722,707 Lund University 2009-05-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 breast MCF7 cell line
5 GSM416757 H520 709,156 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:cell line title:H520 description:none
6 GSM416761 MB-MDA231 616,094 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:cell line title:MB-MDA231 description:none
7 GSM416755 143B 604,003 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 bone 143B
8 GSM416754 U2OS 571,411 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 bone U2OS
9 GSM416758 SW480 560,242 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 colon SW480
10 GSM416733 HEK293 541,755 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 kidney HEK293
11 GSM416759 DLD2 449,905 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:cell line title:DLD2 description:none
12 GSM410823 synthetic_miRNAs_SREK_amplified_rep1 473 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Homo sapiens) (GPL9138) SRA Homo sapiens
Homo sapiens		 unclassified source_name:synthetic miRNA title:synthetic_miRNAs_SREK_amplified_rep1 description:none
13 GSM410824 synthetic_miRNAs_SREK_amplified_rep2 473 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Homo sapiens) (GPL9138) SRA Homo sapiens
Homo sapiens		 unclassified source_name:synthetic miRNA title:synthetic_miRNAs_SREK_amplified_rep2 description:none
14 GSM410825 synthetic_miRNAs_SREK_amplified_rep3 473 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Homo sapiens) (GPL9138) SRA Homo sapiens
Homo sapiens		 unclassified source_name:synthetic miRNA title:synthetic_miRNAs_SREK_amplified_rep3 description:none
15 GSM410826 synthetic_miRNAs_modban_amplified_rep1 471 Hubrecht Institute 2009-06-01 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 unclassified source_name:synthetic miRNAs title:synthetic_miRNAs_modban_amplified_rep1 description:none
16 GSM410827 synthetic_miRNAs_modban_amplified_rep2 471 Hubrecht Institute 2009-06-01 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 unclassified source_name:synthetic miRNAs title:synthetic_miRNAs_modban_amplified_rep2 description:none
17 GSM410828 synthetic_miRNAs_modban_amplified_rep3 471 Hubrecht Institute 2009-06-01 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 unclassified source_name:synthetic miRNAs title:synthetic_miRNAs_modban_amplified_rep3 description:none
18 GSM413575 T-cells_CD4_naive 454 "Sapienza" University of Rome 2009-06-05 [HT Sequencing] LC Sciences Human 454 miRHuman_8.2 [condensed version] (GPL8664) RNA Homo sapiens
Homo sapiens		 peripheral blood peripheral blood
19 GSM413576 T-cells_CD4_centralmemory 454 "Sapienza" University of Rome 2009-06-05 [HT Sequencing] LC Sciences Human 454 miRHuman_8.2 [condensed version] (GPL8664) RNA Homo sapiens
Homo sapiens		 peripheral blood peripheral blood
20 GSM413577 T-cells_CD8_naive 454 "Sapienza" University of Rome 2009-06-05 [HT Sequencing] LC Sciences Human 454 miRHuman_8.2 [condensed version] (GPL8664) RNA Homo sapiens
Homo sapiens		 peripheral blood peripheral blood
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