Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)
  Primates
(5,069)
  Rodents
(189,292)
  Mammals
(16,929)
  Vertebrates
(18,759)
  Invertebrates
(38,793)
  Plants
(93,301)
  Bacteria
(39,613)
  Viruses
(1,263)
  Phages
(101)
  Unclassified
(5,497)
  All
(931,947)
 
  SAGE NlaIII
(756)
  SAGE RsaI
(0)
  SAGE Sau3A
(15)
  MPSS
(35)
  GeneChip
(243,618)
  Tiling Array
(9,515)
  cDNA Array
(39,559)
  Oligo Array
(107,373)
  Bead Array
(94,915)
  Protein Array
(0)
  Antibody
(1,134)
  RT-PCR
(3,343)
  HT-Seq
(14,724)
  Other
(6,606)
  All
(521,594)
 
  brain
(836)
  blood
(3,272)
  connective
(1,441)
  reproductive
(916)
  muscular
(288)
  digestive
(517)
  liver
(425)
  lung
(832)
  urinary
(489)
  endo/exo-crine
(1,190)
  embryo
(446)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(422)
  unclassified
(3,650)
  all
(14,724)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM925875 PDAC smallRNAseq 0 Zhongshan Hospital, Fudan University 2012-05-02 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
peripheral blood peripheral blood mononuclear cells
2 GSM925876 BPD smallRNAseq 0 Zhongshan Hospital, Fudan University 2012-05-02 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
peripheral blood peripheral blood mononuclear cells
3 GSM925877 Healthy smallRNAseq 0 Zhongshan Hospital, Fudan University 2012-05-02 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
peripheral blood peripheral blood mononuclear cells
4 GSM586971 Sox2 ChIP-Seq 0 ZheJiang University 2010-08-25 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens
unclassified source_name:Sox2 ChIP title:Sox2 ChIP-Seq description:Chromatin IP against Sox2
5 GSM586972 Normal IgG ChIP-Seq 0 ZheJiang University 2010-08-25 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens
unclassified source_name:Normal IgG ChIP title:Normal IgG ChIP-Seq description:Chromatin IP against IgG
6 GSM779437 cisplatin_sensitive_cell line_MDB-Seq 0 ZheJiang University 2011-08-16 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens
unclassified source_name:cisplatin sensitive cell line title:cisplatin_sensitive_cell line_MDB-Seq
7 GSM779438 cisplatin_resistant_cell line_MDB-Seq 0 ZheJiang University 2011-08-16 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens
unclassified source_name:cisplatin resistant cell line title:cisplatin_resistant_cell line_MDB-Seq
8 GSM1023059 RNA 03-01, F 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
skin fibroblast
9 GSM1023060 RNA 03-01, i2 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-01, i2 description:ILLUMINA HiSeq sequencing reads
10 GSM1023061 RNA 03-01, i3 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-01, i3 description:ILLUMINA HiSeq sequencing reads
11 GSM1023062 RNA 03-01, i9 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-01, i9 description:ILLUMINA HiSeq sequencing reads
12 GSM1023063 RNA 03-02, F 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
skin fibroblast
13 GSM1023064 RNA 03-02, i5 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-02, i5 description:ILLUMINA HiSeq sequencing reads
14 GSM1023065 RNA 03-02, i8 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-02, i8 description:ILLUMINA HiSeq sequencing reads
15 GSM1023066 RNA 03-02, i9 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-02, i9 description:ILLUMINA HiSeq sequencing reads
16 GSM1023067 RNA 03-03, F 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
skin fibroblast
17 GSM1023068 RNA 03-03, i2 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-03, i2 description:ILLUMINA HiSeq sequencing reads
18 GSM1023069 RNA 03-03, i3 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-03, i3 description:ILLUMINA HiSeq sequencing reads
19 GSM1023070 RNA 03-03, i4 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
unclassified source_name:iPS title:RNA 03-03, i4 description:ILLUMINA HiSeq sequencing reads
20 GSM1023071 RNA 03-04, F 0 Yale University 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) SRA Homo sapiens
Homo sapiens
skin fibroblast
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