Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)
  Primates
(206)
  Rodents
(12,612)
  Mammals
(782)
  Vertebrates
(1,156)
  Invertebrates
(4,045)
  Plants
(6,642)
  Bacteria
(2,980)
  Viruses
(50)
  Phages
(4)
  Unclassified
(287)
  All
(47,440)
 
  SAGE NlaIII
(77)
  SAGE RsaI
(0)
  SAGE Sau3A
(5)
  MPSS
(2)
  GeneChip
(7,376)
  Tiling Array
(1,347)
  cDNA Array
(1,905)
  Oligo Array
(4,313)
  Bead Array
(2,063)
  Protein Array
(0)
  Antibody
(35)
  RT-PCR
(139)
  HT-Seq
(1,280)
  Other
(82)
  All
(18,625)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Diagnosis of Alzheimer's Disease Based on Disease-Specific Autoantibody Profiles (GSE29676) [Other] Invitrogen ProtoArray v5.0 (GPL13669) UMDNJ-SOM 2011-06-01 Homo sapiens
Homo sapiens
5,773,320
(9,480 x 609)
583 26 by_platform
by_series
2 Diagnosis of Parkinson's Disease Based on Disease-Specific Autoantibody Profiles (GSE29654) [Other] Invitrogen ProtoArray v5.0 (GPL13669) UMDNJ-SOM 2011-06-01 Homo sapiens
Homo sapiens
3,261,120
(9,480 x 344)
10 308 26 by_platform
by_series
3 Profiling antibody responses to M. tuberculosis proteins in TB suspects’ sera using full-proteome microarrays. (GSE19433) [Other] Mycobacterium tuberculosis H37Rv proteome microarray (GPL9790) Albert Einstein College of Medicine 2009-12-11 Homo sapiens
Homo sapiens
2,561,875
(4,099 x 625)
625 by_platform
by_series
4 Profiling proteome-scale antibody responses to M. tuberculosis (GSE31368) [Other] Mycobacterium tuberculosis H37Rv proteome microarray (GPL9790) Albert Einstein College of Medicine 2011-08-12 Homo sapiens
Homo sapiens
2,324,133
(4,099 x 567)
567 by_platform
by_series
5 Profiling proteome-scale antibody responses to M. tuberculosis proteins in TB suspect's sera (GSE30722) [Other] Mycobacterium tuberculosis H37Rv proteome microarray (GPL9790) Albert Einstein College of Medicine 2011-07-15 Homo sapiens
Homo sapiens
1,684,689
(4,099 x 411)
411 by_platform
by_series
6 Autoantibodies are abundant in all human sera: a demographic characterization via protein microarrays (GSE39087) [Other] Invitrogen ProtoArray v5.0 (GPL13669) UMDNJ-SOM 2012-07-03 Homo sapiens
Homo sapiens
1,573,680
(9,480 x 166)
7 143 16 by_platform
by_series
7 Autoantibody profile timecourse of UNK (GSE32691) [Other] Invitrogen ProtoArray v5.0 (full array layout) (GPL14689) Stanford 2011-10-07 Homo sapiens
Homo sapiens
859,584
(23,232 x 37)
37 by_platform
by_series
8 Integrated analysis of omics profiles (GSE33029) [Other] Invitrogen ProtoArray v5.0 (full array layout) (GPL14689) Stanford 2011-10-17 Homo sapiens
Homo sapiens
859,584
(23,232 x 37)
37 by_platform
by_series
9 IgG antibody profiling of Leptospira interrogans serovar Copenhageni in infected and non-infected subjects using protein microarray (GSE42720) [Other] UCI Leptospira interrogans serovar Copenhageni Protein Microarray chip LI6 (GPL16351) University of California Irvine 2012-12-04 Homo sapiens
Homo sapiens
691,850
(2,525 x 274)
274 by_platform
by_series
10 Identifying Compartment-specific Alloimmune Targets After Renal Transplantation by integrated genomics (GSE10452) [Other] ProtoArray Human Protein Microarray v3.0 (GPL6454) Stanford University 2008-02-08 Homo sapiens
Homo sapiens
691,200
(19,200 x 36)
36 by_platform
by_series
11 Compartmental Localization and Clinical Relevance of MICA Antibodies after Renal Transplantation (GSE14329) [Other] ProtoArray Human Protein Microarray v3.0 (GPL6454) Stanford University 2009-01-07 Homo sapiens
Homo sapiens
576,000
(19,200 x 30)
30 by_platform
by_series
12 Protein Microarrays Discover Angiotensinogen and PRKRIP1 as Novel Targets for Autoantibodies in Chronic Renal Disease (GSE23609) [Other] ProtoArray Human Protein Microarray v3.0 (GPL6454) Stanford University 2010-08-13 Homo sapiens
Homo sapiens
460,800
(19,200 x 24)
7 17 by_platform
by_series
13 High-throughput sequencing of small RNAs from HeLa cells (GSE10829) [Other] MPI_Chen_HeLa_Solexa_2007 (GPL6584) MPI molecular genetics 2008-03-14 Homo sapiens
Homo sapiens
361,478
(361,478 x 1)
1 by_platform
by_series
14 Identification of Proteins Binding Coding and Non-coding Human RNAs using Protein Microarrays (GSE34794) [Other] Invitrogen ProtoArray v5.0 (GPL13669) Stanford University 2011-12-30 Homo sapiens
Homo sapiens
189,600
(9,480 x 20)
20 by_platform
by_series
15 Immune response biomarker profiling of serum from prostate cancer patients treated with anti-CTLA-4 immunotherapy. (GSE39688) [Other] Invitrogen Protoarray v4.0 (GPL15855) UCSF 2012-07-26 Homo sapiens
Homo sapiens
174,174
(7,917 x 22)
22 by_platform
by_series
16 Allogeneic antibodies specifically target AML antigen NuSAP1 after bone marrow transplantation (GSE15255) [Other] ProtoArray Human Protein Microarray v3.0 (GPL6454) Stanford University 2009-03-17 Homo sapiens
Homo sapiens
172,800
(19,200 x 9)
9 by_platform
by_series
17 Complement C3 deposition on nucleic acids is characteristic of immune complex initiated classical pathway overdrive in lupus erythematosus (GSE26768) [Other] AbC_ELTE_human_432_v1 (GPL11652) Eötvös Loránd University 2011-01-20 Homo sapiens
Homo sapiens
158,976
(432 x 368)
368 by_platform
by_series
18 Segmentation and intensity estimation for microarray images with saturated pixels (GSE33899) [Other] ASU_random-sequence peptide microarray (GPL14921) Biodesign Institute 2011-11-22 Homo sapiens
Homo sapiens
139,176
(23,196 x 6)
6 by_platform
by_series
19 Prostate Adenocarcinoma: Candidate Genomic Signatures Prognostic of Biochemical Failure (GSE7949) [Other] University of Pennsylvania/Nathanson Lab_HomoSapiens_ChromosomeRegion_Virtual (GPL5338) University of Pennsylvania 2007-05-29 Homo sapiens
Homo sapiens
121,695
(5,795 x 21)
21 by_platform
by_series
20 Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine (GSE42184) [Other] NCI Glycoarray-220 (GPL16242) NCI 2012-11-09 Homo sapiens
Homo sapiens
111,760
(220 x 508)
508 by_platform
by_series
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