Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page

An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Human (3,705)   Primates (37)   Rodents (1,748)   Mammals (295)   Vertebrates (402)   Invertebrates (1,004)   Plants (2,170)   Bacteria (1,636)   Viruses (78)   Phages (8)   Unclassified (399)   All (11,528)

SAGE NlaIII (5)   SAGE RsaI (0)   SAGE Sau3A (1)   MPSS (2)   GeneChip (310)   Tiling Array (0)   cDNA Array (0)   Oligo Array (0)   Bead Array (119)   Protein Array (1)   Antibody (20)   RT-PCR (82)   HT-Seq (0)   Other (36)   All (3,705)   1   |   2   |   3   |   4   |   5      »       Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification Keywords used for the classification are shown with bold font. 1 GPL14773 WashingtonUniversity_Efimov_Human_Heart_96well_v1 96 Washington University in St. Louis 2011-10-23 Applied Biosystems Homo sapiens RT-PCR RT-PCR, WashingtonUniversity_Efimov_Human_Heart_96well_v1, PCR assay 2 GPL15482 Applied Biosystems/University of Birmingham Human RT-PCR array 96 University oif Birmingham 2012-04-23 Applied Biosystems Homo sapiens RT-PCR RT-PCR, Applied Biosystems/University of Birmingham Human RT-PCR array, PCR assay. 96-well custom gene expression array. Catalog number of plate: 4391524 3 GPL16278 SABiosciences Human Mitochondria Energy Array 89 University of Texas Health Science Center 2012-11-14 SABiosciences Homo sapiens RT-PCR RT-PCR, SABiosciences Human Mitochondria Energy Array, Human Mitochondria Energy Array SABiosciences RT² Profiler panel of PCR assays. 4 GPL14907 SA Biosciences Human Genome V2.0 miRNA PCR Arrays: MAH-3200 (MAH-3100 & MAH-3101) 768 University of Pittsburgh 2011-11-21 SA Biosciences - A Qiagen Company Homo sapiens RT-PCR RT-PCR, SA Biosciences Human Genome V2.0 miRNA PCR Arrays: MAH-3200 (MAH-3100 & MAH-3101), 5 GPL13680 Taqman qRT-PCR Homo sapiens 384 384 University of Namur 2011-06-02 Applied Biosystems Homo sapiens RT-PCR RT-PCR, Taqman qRT-PCR Homo sapiens 384, TaqMan-based qRT-PCR assay 6 GPL13728 TaqMan qRT-PCR Homo sapiens Low-Density Array 380 380 University of Namur 2011-06-15 Applied Biosystems Homo sapiens RT-PCR RT-PCR, TaqMan qRT-PCR Homo sapiens Low-Density Array 380, TaqMan-based qRT-PCR assay. 7 GPL14924 TaqMan qRT-PCR Homo sapiens Low-Density Array 380 v 2 358 University of Namur 2011-11-23 Applied Biosystems Homo sapiens RT-PCR RT-PCR, TaqMan qRT-PCR Homo sapiens Low-Density Array 380 v 2, TaqMan-based qRT-PCR assay similar to GPL13728 8 GPL9019 TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems) 157 University of Modena and Reggio Emilia 2009-08-11 Homo sapiens RT-PCR RT-PCR, TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems), The original platform is composed of two 96-well plates (Plate A and Plate B) whose content is here merged into one single platform. Applied Biosystems Catalog Number: 4365409. Currently no more available for sale. 9 GPL16589 SABiosciences Real-time quantitative PCR analysis PAHS-135Z 96 UNIVERSITY OF MINNESOTA 2013-02-04 SABiosciences Homo sapiens RT-PCR RT-PCR, SABiosciences Real-time quantitative PCR analysis PAHS-135Z, PCR assay SABiosciences RT² Profiler panel of PCR assays. 10 GPL15634 Applied Biosystems Human TaqMan Low Density Array (TLDA, v2.0) (Card A) 381 University of Miami 2012-05-31 Applied Biosystems Homo sapiens RT-PCR RT-PCR, Applied Biosystems Human TaqMan Low Density Array (TLDA, v2.0) (Card A), DC-APC PCR assay panel Microfluidic 384-well TaqManâ„¢ real time RT-PCR platform version 2.0 (Card A) 11 GPL9460 Applied Biosystems Human TaqMan Low Density Array (TLDA, v1.0) 365 University of Miami 2009-10-18 Applied Biosystems Homo sapiens RT-PCR RT-PCR, Applied Biosystems Human TaqMan Low Density Array (TLDA, v1.0), Microfluidic 384-well TaqMan real time RT-PCR platform version 1.0 12 GPL15647 Applied Biosystems Human TaqMan Low Density Array (TLDA, v2.0) (Card B) 294 University of Miami 2012-06-04 Applied Biosystems Homo sapiens RT-PCR RT-PCR, Applied Biosystems Human TaqMan Low Density Array (TLDA, v2.0) (Card B), DC-APC PCR assay panel Microfluidic 384-well TaqManâ„¢ real time RT-PCR platform version 2.0 (Card B) 13 GPL11050 Applied Biosystems Human MicroRNA Array (A) plates 378 University of Leicester 2010-10-14 Applied Biosystems Homo sapiens RT-PCR RT-PCR, Applied Biosystems Human MicroRNA Array (A) plates, Human MicroRNA Array (A) plates (containing assays for 377 miRNA) were used (Applied Biosystems, #4398965). 14 GPL8370 Human Stress & Toxicity PathwayFinder PCR Array PAHS-003A 96 University of Illinois at Urbana-Champaign 2009-03-31 Homo sapiens RT-PCR RT-PCR, Human Stress & Toxicity PathwayFinder PCR Array PAHS-003A, From manufacturer SA biosciences (former superarray) website: The Human Stress and Toxicity PathwayFinderâ„¢ RT²Profilerâ„¢ PCR Array profiles the expression of 84 genes whose expression level is indicative of stress and toxicity. The array includes genes that are directly up-regulated by oxidative or metabolic stress and by heat shock. The array also includes genes representative of pathways activated by prolonged stress, which range from cell death by apoptosis or necrosis to growth arrest and senescence to proliferation and carcinogenesis. This kit is also designed to include only those genes that have been reported in the literature to respond to a toxic compound at the transcriptional level. Using real-time PCR, you can easily and reliably analyze expression of a focused panel of genes related to Stress & Toxicity Pathway with this array. 15 GPL9850 DNA Damage Signaling Pathway PCR Array Human PAHS-029 96 University of Illinois at Urbana-Champaign 2009-12-31 Homo sapiens RT-PCR RT-PCR, DNA Damage Signaling Pathway PCR Array Human PAHS-029, The Human DNA Damage Signaling RT² Profilerâ„¢ PCR Array profiles the expression of 84 genes involved in DNA damage signaling pathways. The genes featured are those associated with the ATR/ATM signaling network and transcriptional targets of DNA damage response. DNA damage can result in cell cycle arrest, apoptosis, and the stabilization and repair of the cellular genome. Using real-time PCR, you can easily and reliably analyze expression of a focused panel of genes related to DNA Damage Signaling with this array. 16 GPL6926 Superarray DNA damage signaling APHS-029B 96 University of Illinois 2008-06-03 Homo sapiens RT-PCR RT-PCR, Superarray DNA damage signaling APHS-029B, The Human DNA Damage Signaling RT² Profilerâ„¢ PCR Array profiles the expression of 84 genes involved in DNA damage signaling pathways. The genes featured are those associated with the ATR/ATM signaling network and transcriptional targets of DNA damage response. DNA damage can result in cell cycle arrest, apoptosis, and the stabilization and repair of the cellular genome. 17 GPL6933 Superarray Signal Transduction PathwayFinder PCR Array APHS-014b 96 University of Illinois 2008-06-04 Homo sapiens RT-PCR RT-PCR, Superarray Signal Transduction PathwayFinder PCR Array APHS-014b, The Human Signal Transduction PathwayFinderâ„¢ RT²Profilerâ„¢ PCR Array profiles the expression of 84 key genes representative of 18 different signal transduction pathways listed below. Using real-time PCR, you can easily and reliably analyze the expression of a focused panel of genes related to any of the 18 signal transduction pathways that may be involved in your favorite biological response. 18 GPL16241 Applied Biosystems TaqMan nuclear receptor signature 96-well fast plate 96 University of Florida 2012-11-02 Applied Biosystems Homo sapiens RT-PCR RT-PCR, Applied Biosystems TaqMan nuclear receptor signature 96-well fast plate, The TaqMan® Array Human Nuclear Receptors 96-well Plate contains 92 assays to nuclear receptor associated genes and 4 assays to candidate endogenous control genes. The panel of assays in the TaqMan® Array Human Nuclear Receptors 96-well Plate targets genes from nuclear receptor Subfamilies 0,1,2,3,4,5, and 6. Other nuclear receptor associated genes are also on the panel. 19 GPL15796 PBMC gene expression RT-PCR assay 16 University of Eastern Finland 2012-07-11 http://www.appliedbiosystems.com/ Homo sapiens RT-PCR RT-PCR, PBMC gene expression RT-PCR assay, RT-PCR (TaqMan® Gene Expression Assay) 20 GPL13505 SABiosciences Human Dendritic and Antigen Presenting Cell PCR Array 96 University of Debrecen 2011-05-08 SABiosciences Homo sapiens RT-PCR RT-PCR, SABiosciences Human Dendritic and Antigen Presenting Cell PCR Array, DC-APC Array SABiosciences RT² Profiler PCR Array. 1   |   2   |   3   |   4   |   5      »