Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(756)
  SAGE RsaI
(0)
  SAGE Sau3A
(15)
  MPSS
(35)
  GeneChip
(0)
  Tiling Array
(9,457)
  cDNA Array
(39,248)
  Oligo Array
(0)
  Bead Array
(90,658)
  Protein Array
(0)
  Antibody
(1,130)
  RT-PCR
(2,916)
  HT-Seq
(13,834)
  Other
(6,106)
  All
(502,421)
 
  brain
(159)
  blood
(784)
  connective
(190)
  reproductive
(87)
  muscular
(0)
  digestive
(240)
  liver
(198)
  lung
(145)
  urinary
(0)
  endo/exo-crine
(269)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(214)
  unclassified
(536)
  all
(2,916)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM89156 Brain_Rep1_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
cerebrum Brain tissue
2 GSM89157 Brain_Rep2_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
cerebrum Brain tissue
3 GSM89158 Brain_Rep3_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
cerebrum Brain tissue
4 GSM89159 Brain_Rep4_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
cerebrum Brain tissue
5 GSM89160 Liver_Rep1_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
liver/hepato Liver tissue
6 GSM89161 Liver_Rep2_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
liver/hepato Liver tissue
7 GSM89162 Liver_Rep3_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
liver/hepato Liver tissue
8 GSM89163 Liver_Rep4_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
liver/hepato Liver tissue
9 GSM89164 Lung_Rep1_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
lung Lung tissue
10 GSM89165 Lung_Rep2_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
lung Lung tissue
11 GSM89166 Lung_Rep3_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
lung Lung tissue
12 GSM89167 Lung_Rep4_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
lung Lung tissue
13 GSM89168 UHR_Rep1_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
unclassified source_name:UHR tissue title:UHR_Rep1_TaqMan description:UHR tissue, Taqman
14 GSM89169 UHR_Rep2_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
unclassified source_name:UHR tissue title:UHR_Rep2_TaqMan description:UHR tissue, Taqman
15 GSM89170 UHR_Rep3_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
unclassified source_name:UHR tissue title:UHR_Rep3_TaqMan description:UHR tissue, Taqman
16 GSM89171 UHR_Rep4_TaqMan 1,376 Applied Biosystems 2005-12-23 [RT-PCR] Applied Biosystems TaqMan Gene Expression Assays (human) (GPL2845) RNA Homo sapiens
Homo sapiens
unclassified source_name:UHR tissue title:UHR_Rep4_TaqMan description:UHR tissue, Taqman
17 GSM800586 CCR9- 1,239 Cornell University 2011-09-22 [RT-PCR] Wafergen Biosystems SmartChip Human Oncology Panel v2 (GPL14610) RNA Homo sapiens
Homo sapiens
unclassified source_name:CRC cells title:CCR9-
18 GSM800587 CCR9+ 1,239 Cornell University 2011-09-22 [RT-PCR] Wafergen Biosystems SmartChip Human Oncology Panel v2 (GPL14610) RNA Homo sapiens
Homo sapiens
unclassified source_name:CRC cells title:CCR9+ description:control
19 GSM129638 MAQC_TAQ_1_A1 1,044 NCTR/FDA 2006-08-22 [RT-PCR] TaqMan Human MAQC (TAQ) (GPL4097) RNA Homo sapiens
Homo sapiens
unclassified source_name:MAQC sample A, i.e., Stratagene Universal Human Reference RNA (UHRR, Catalog #740000) title:MAQC_TAQ_1_A1 description:NA
20 GSM129639 MAQC_TAQ_1_A2 1,044 NCTR/FDA 2006-08-22 [RT-PCR] TaqMan Human MAQC (TAQ) (GPL4097) RNA Homo sapiens
Homo sapiens
unclassified source_name:MAQC sample A, i.e., Stratagene Universal Human Reference RNA (UHRR, Catalog #740000) title:MAQC_TAQ_1_A2 description:NA
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