Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(16,283)		   Primates
(80)		   Rodents
(6,896)		   Mammals
(298)		   Vertebrates
(469)		   Invertebrates
(517)		   Plants
(5,385)		   Bacteria
(1,328)		   Viruses
(9)		   Phages
(0)		   Unclassified
(100)		   All
(31,365)		  
  SAGE NlaIII
(17)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(8,212)		   Tiling Array
(193)		   cDNA Array
(1,332)		   Oligo Array
(6,079)		   Bead Array
(377)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(17)		   HT-Seq
(46)		   Other
(10)		   All
(16,283)		  
  brain
(0)		   blood
(4)		   connective
(12)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(1)		   unclassified
(0)		   all
(17)		  
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM769503 K562_intercellular_miRNAs 384 Tokyo Medical University 2011-07-31 [RT-PCR] Taqman Array Human MicroRNA A Card v2.0 (GPL13987) RNA Homo sapiens
Homo sapiens		 bone marrow K562 cell line
2 GSM769504 HUVEC intercellular miRNAs 384 Tokyo Medical University 2011-07-31 [RT-PCR] Taqman Array Human MicroRNA A Card v2.0 (GPL13987) RNA Homo sapiens
Homo sapiens		 vein HUVEC
3 GSM769505 K562_extracellular_miRNAs 384 Tokyo Medical University 2011-07-31 [RT-PCR] Taqman Array Human MicroRNA A Card v2.0 (GPL13987) RNA Homo sapiens
Homo sapiens		 bone marrow Supernatant of K562 cell line
4 GSM769506 HUVEC extracellular miRNAs 384 Tokyo Medical University 2011-07-31 [RT-PCR] Taqman Array Human MicroRNA A Card v2.0 (GPL13987) RNA Homo sapiens
Homo sapiens		 vein Supernatant of HUVEC
5 GSM769507 K562+HUVEC_extracellular_miRNA 384 Tokyo Medical University 2011-07-31 [RT-PCR] Taqman Array Human MicroRNA A Card v2.0 (GPL13987) RNA Homo sapiens
Homo sapiens		 pooled Supernatant of K562 cell line with HUVEC
6 GSM842855 Normal fibroblasts 88 Faculty of Life Sciences, Kumamoto University 2011-12-05 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel [MIHS-103Z] (GPL14956) RNA Homo sapiens
Homo sapiens		 skin Human dermal fibroblasts obtained by skin biopsy from healthy donors
7 GSM842856 SSc fibroblasts 88 Faculty of Life Sciences, Kumamoto University 2011-12-05 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel [MIHS-103Z] (GPL14956) RNA Homo sapiens
Homo sapiens		 skin Human dermal fibroblasts obtained by skin biopsy from patients with diffuse cutaneous SSc
8 GSM855974 Normal fibroblasts 88 Kumamoto University 2012-01-03 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel (GPL15085) other Homo sapiens
Homo sapiens		 skin Human dermal fibroblasts obtained by skin biopsy from healthy donors
9 GSM855975 Normal fibroblasts + TGF-β1 88 Kumamoto University 2012-01-03 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel (GPL15085) other Homo sapiens
Homo sapiens		 skin Human dermal fibroblasts obtained by skin biopsy from healthy donors
10 GSM855976 SSc fibroblasts 88 Kumamoto University 2012-01-03 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel (GPL15085) other Homo sapiens
Homo sapiens		 skin Human dermal fibroblasts obtained by skin biopsy from patients with diffuse cutaneous SSc
11 GSM1063144 Normal Skin 86 Kumamoto University 2013-01-14 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel (GPL15085) other Homo sapiens
Homo sapiens		 skin Human skin obtained by skin biopsy from healthy donors
12 GSM1063145 SSc Skin 86 Kumamoto University 2013-01-14 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel (GPL15085) other Homo sapiens
Homo sapiens		 skin Human skin obtained by involved skin biopsy from patients with diffuse cutaneous SSc.
13 GSM1063146 LSc Skin 86 Kumamoto University 2013-01-14 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel (GPL15085) other Homo sapiens
Homo sapiens		 skin Human skin obtained by involved skin biopsy from patients with LSc.
14 GSM1063147 Keloid Skin 86 Kumamoto University 2013-01-14 [RT-PCR] SABiosciences Human Cell Development & Differentiation miRNA PCR ArrayHuman panel (GPL15085) other Homo sapiens
Homo sapiens		 skin Human skin obtained by involved skin biopsy from patients with Keloid.
15 GSM830241 Not stimulated normal fibroblasts 84 Faculty of Life Sciences, Kumamoto University 2011-11-09 [RT-PCR] SABiosciences Human Dermal Fibroblastsl PCR assay panel [PAHS-013] (GPL14864) RNA Homo sapiens
Homo sapiens		 skin Not stimulated normal fibroblasts
16 GSM830242 IL-17A-stimulated normal fibroblasts 84 Faculty of Life Sciences, Kumamoto University 2011-11-09 [RT-PCR] SABiosciences Human Dermal Fibroblastsl PCR assay panel [PAHS-013] (GPL14864) RNA Homo sapiens
Homo sapiens		 skin IL-17A-stimulated normal fibroblasts
17 GSM830243 IL-17F-stimulated normal fibroblasts 84 Faculty of Life Sciences, Kumamoto University 2011-11-09 [RT-PCR] SABiosciences Human Dermal Fibroblastsl PCR assay panel [PAHS-013] (GPL14864) RNA Homo sapiens
Homo sapiens		 skin IL-17F-stimulated normal fibroblasts
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