Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(756)		   SAGE RsaI
(0)		   SAGE Sau3A
(15)		   MPSS
(35)		   GeneChip
(234,596)		   Tiling Array
(9,457)		   cDNA Array
(39,248)		   Oligo Array
(103,669)		   Bead Array
(90,658)		   Protein Array
(0)		   Antibody
(1,130)		   RT-PCR
(2,916)		   HT-Seq
(13,834)		   Other
(6,106)		   All
(502,421)		  
  brain
(1)		   blood
(5)		   connective
(1)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(7)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(1)		   unclassified
(0)		   all
(15)		  
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM10429 Kidney outer medullary collecting duct. 26,071 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney microdissected outer medullary collecting ducts
2 GSM10428 Kidney cortical collecting duct 22,657 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney microdissected cortical collecting ducts
3 GSM10427 Kidney distal convoluted tubule 21,390 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney distal convoluted tubule
4 GSM10419 Kidney glomerulus 20,525 CEA Saclay 2003-09-23 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney glomerulus
5 GSM10426 Kidney cortical thick ascending limb 20,018 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 cerebrum microdissected cortical thick ascending limbs
6 GSM10425 Kidney medullary thick ascending limb 19,333 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney medullary thick ascending limb
7 GSM10423 Kidney proximal convoluted tubule 17,170 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney proximal convoluted tubule
8 GSM10424 Kidney proximal straight tubule 16,314 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney proximal straight tubule
9 GSM36126 Aldosterone Producing Adenoma 13,386 Inserm Institut Cochin 2004-11-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 pooled Adrenocortical adenoma producing aldosterone. Preoperative diagnosis of primary aldosteronism with increased aldosterone, increased aldosterone to renin ratio, lateralisation of aldosterone to cortisol ratio on adrenal venous sampling. Histology: 10 mm, unique adenoma with no adjacent hyperplasia Keywords = adrenocortical adenoma aldosterone
10 GSM36127 Zona Glomerulosa (adjacent to an APA) 13,386 Inserm Institut Cochin 2004-11-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 adipos Microdissected zona glomerulosa adjacent to an aldosterone producing adenoma Preoperative diagnosis of primary hyperaldosteronism by increased aldosterone, increased aldosterone to renin ratio, lateralisation of the aldosterone to cortisol ratio after adrenal venous sampling. Histological confirmation of a unique 10 mm adenoma; no hyperplasia of the adjacent zona glomerulosa. Microdissection on fresh tissue with a forceps after fat cleansing: the glomerulosa comes with the adrenal capsule. Keywords = adrenocortical adenoma aldosterone
11 GSM32698 U937 cell line untreated 8,913 Human Genomic Institut 2004-10-19 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 lymphnode U937 cell line
12 GSM32699 U937 differentiated cells 7,151 Human Genomic Institut 2004-10-19 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 lymphnode U937 cell line
13 GSM151619 NB4 cell line untreated 6,776 Institut de Génétique Humaine 2006-12-15 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 bone marrow NB4 cell line (Acute Promyelocytic Leukemia model)
14 GSM151622 NB4 cell line induced to differentiate by a 48h exposure to 1µM ATRA 6,218 Institut de Génétique Humaine 2006-12-15 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 bone marrow NB4 cell line (Acute Promyelocytic Leukemia model) expposed to 1µM ATRA for 48hours
15 GSM32700 Purified blood reticulocytes 268 Human Genomic Institut 2004-10-20 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 peripheral blood Blood reticulocytes from ten healthy adult
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