Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(3,747)

Primates
(38)

Rodents
(1,772)

Mammals
(300)

Vertebrates
(408)

Invertebrates
(1,027)

SAGE RsaI
(0)

Tiling Array
(706)

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	Platform ID	Title	Number of the probes	Institute	Submission date	Manufacturer	Species	Platform class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GPL15746	NimbleGen Human CGH 4.2M Whole-Genome Tiling Array v1.0 array [100710_HG19_WG_CGH_v1.0_UX1]	4,200,002	NimbleGen Systems, Inc.	2012-06-27	NimbleGen	Homo sapiens	Tiling Array	in situ oligonucleotide, NimbleGen Human CGH 4.2M Whole-Genome Tiling Array v1.0 array [100710_HG19_WG_CGH_v1.0_UX1], Annotation in this record based on hg19. Design name: 100710_HG19_WG_CGH_PERF_01 Design name: 100710_HG19_WG_CGH_PERF_02 Design name: 100710_HG19_WG_CGH_PERF_03 Design id: 538913
2	GPL4499	Human whole genome tiling array, chip 11 of 14	3,317,284	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 11 of 14,
3	GPL4496	Human whole genome tiling array, chip 08 of 14	3,316,927	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 08 of 14,
4	GPL4495	Human whole genome tiling array, chip 07 of 14	3,207,896	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 07 of 14,
5	GPL4500	Human whole genome tiling array, chip 12 of 14	3,201,270	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 12 of 14,
6	GPL4502	Human whole genome tiling array, chip 13 of 14	3,161,722	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 13 of 14,
7	GPL6138	GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36	3,138,510	The University of Tokyo	2007-11-14	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
8	GPL4490	Human whole genome tiling array, chip 02 of 14	3,121,530	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 02 of 14,
9	GPL4493	Human whole genome tiling array, chip 05 of 14	3,110,356	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 05 of 14,
10	GPL5661	Human tiling 1.0F array, chip 10 of 14	3,102,388	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 10 of 14,
11	GPL5652	Human tiling 1.0F array, chip 3 of 14	3,102,380	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 3 of 14,
12	GPL5654	Human tiling 1.0F array, chip 4 of 14	3,102,050	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 4 of 14,
13	GPL5662	Human tiling 1.0F array, chip 11 of 14	3,101,750	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 11 of 14,
14	GPL5659	Human tiling 1.0F array, chip 9 of 14	3,101,566	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 9 of 14,
15	GPL6139	GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36	3,101,522	The University of Tokyo	2007-11-14	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
16	GPL5657	Human tiling 1.0F array, chip 7 of 14	3,101,444	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 7 of 14,
17	GPL5664	Human tiling 1.0F array, chip 13 of 14	3,101,278	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 13 of 14,
18	GPL5651	Human tiling 1.0F array, chip 2 of 14	3,100,706	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 2 of 14,
19	GPL5656	Human tiling 1.0F array, chip 6 of 14	3,099,552	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 6 of 14,
20	GPL5658	Human tiling 1.0F array, chip 8 of 14	3,097,794	RIKEN	2007-07-24	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human tiling 1.0F array, chip 8 of 14,

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