Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(77)		   SAGE RsaI
(0)		   SAGE Sau3A
(5)		   MPSS
(2)		   GeneChip
(7,376)		   Tiling Array
(1,347)		   cDNA Array
(1,905)		   Oligo Array
(4,313)		   Bead Array
(2,063)		   Protein Array
(0)		   Antibody
(35)		   RT-PCR
(139)		   HT-Seq
(1,280)		   Other
(82)		   All
(18,625)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Differential DNA methylation regions in cytokine and transcription factor genomic loci associate with childhood physical aggression (GSE47193) [Tiling Array] Human aggressivity cytokine loci tiling for ChIP (Agilent-021772; genome assembly hg18) (GPL17186) McGill University 2013-05-22 Homo sapiens
Homo sapiens		 551,040
(15,744 x 35) 		35 by_platform
by_series
2 Expression analysis of prostate tissue on locus 8q24 (GSE45934) [Tiling Array] Homo sapiens 390K tiling v3 prostate_8q24 (GPL16993) University of Iceland 2013-04-10 Homo sapiens
Homo sapiens		 6,482,772
(720,308 x 9) 		9 by_platform
by_series
3 Expression analysis of prostate tissue on locus 8q24 (GSE45934) [Tiling Array] Homo sapiens 390K tiling v2 prostate_8q24 (GPL16992) University of Iceland 2013-04-10 Homo sapiens
Homo sapiens		 2,738,246
(391,178 x 7) 		7 by_platform
by_series
4 Expression analysis of prostate tissue on locus 8q24 (GSE45934) [Tiling Array] Homo sapiens 390K tiling v1 prostate_8q24 (GPL16991) University of Iceland 2013-04-10 Homo sapiens
Homo sapiens		 2,719,353
(388,479 x 7) 		7 by_platform
by_series
5 Expression analysis of prostate tissue on locus 8q24 part 3 (GSE45925) [Tiling Array] Homo sapiens 390K tiling v3 prostate_8q24 (GPL16993) University of Iceland 2013-04-09 Homo sapiens
Homo sapiens		 6,482,772
(720,308 x 9) 		9 by_platform
by_series
6 Expression analysis of prostate tissue on locus 8q24 part 2 (GSE45922) [Tiling Array] Homo sapiens 390K tiling v2 prostate_8q24 (GPL16992) University of Iceland 2013-04-09 Homo sapiens
Homo sapiens		 2,738,246
(391,178 x 7) 		7 by_platform
by_series
7 Expression analysis of prostate tissue on locus 8q24 part 1 (GSE45920) [Tiling Array] Homo sapiens 390K tiling v1 prostate_8q24 (GPL16991) University of Iceland 2013-04-09 Homo sapiens
Homo sapiens		 2,719,353
(388,479 x 7) 		7 by_platform
by_series
8 Transcription dependent dynamic supercoiling is a short-range genomic force (GSE43752) [Tiling Array] NimbleGen Human ENCODE Tiling Array [Design name: 2007-06-27_MOD_ENCODE_0307_50mer] (GPL16548) NCBI/NLM/NIH 2013-01-25 Homo sapiens
Homo sapiens		 5,769,930
(384,662 x 15) 		15 by_platform
by_series
9 Transcription dependent dynamic supercoiling in Raji human B cells in vivo (GSE43751) [Tiling Array] NimbleGen Human ENCODE Tiling Array [Design name: 2007-06-27_MOD_ENCODE_0307_50mer] (GPL16548) NCBI/NLM/NIH 2013-01-25 Homo sapiens
Homo sapiens		 4,615,944
(384,662 x 12) 		12 by_platform
by_series
10 Gene expression assay from Raji human B cells (GSE43750) [Tiling Array] NimbleGen Human ENCODE Tiling Array [Design name: 2007-06-27_MOD_ENCODE_0307_50mer] (GPL16548) NCBI/NLM/NIH 2013-01-25 Homo sapiens
Homo sapiens		 1,153,986
(384,662 x 3) 		3 by_platform
by_series
11 Transcription forms and remodels supercoiling domains unfolding large scale chromatin structures [NimbleGen ChIP-chip] (GSE43448) [Tiling Array] Nimblegen_Human_720K_Chr11extra (GPL16498) The University of Edinburgh 2013-01-11 Homo sapiens
Homo sapiens		 7,188,820
(718,882 x 10) 		10 by_platform
by_series
12 Transcription forms and remodels supercoiling domains unfolding large scale chromatin structures (GSE43451) [Tiling Array] Nimblegen_Human_720K_Chr11extra (GPL16498) The University of Edinburgh 2013-01-11 Homo sapiens
Homo sapiens		 7,188,820
(718,882 x 10) 		10 by_platform
by_series
13 MCL1 is deregulated in subgroups of diffuse large B-cell lymphoma (GSE43272) [Tiling Array] NimbleGen Human CGH 3x720K Whole-Genome Tiling v3.0 Array [090527_HG18_WG_CGH_v3.1_HX3] (GPL15436) Philipps-Universität Marburg 2013-01-03 Homo sapiens
Homo sapiens		 9,355,970
(719,690 x 13) 		13 by_platform
by_series
14 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P01R] Affymetrix Human Tiling 2.0R Set, Array 1 (GPL4910) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens		 6
(0 x 6) 		6 by_platform
by_series
15 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P02R] Affymetrix Human Tiling 2.0R Set, Array 2 (GPL4911) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens		 6
(0 x 6) 		6 by_platform
by_series
16 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P03R] Affymetrix Human Tiling 2.0R Set, Array 3 (GPL4912) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens		 6
(0 x 6) 		6 by_platform
by_series
17 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P04R] Affymetrix Human Tiling 2.0R Set, Array 4 (GPL4913) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens		 6
(0 x 6) 		6 by_platform
by_series
18 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P05R] Affymetrix Human Tiling 2.0R Set, Array 5 (GPL4914) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens		 6
(0 x 6) 		6 by_platform
by_series
19 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 (GPL4915) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens		 6
(0 x 6) 		6 by_platform
by_series
20 ChIP-chip of 6 chromatin marks (FAIRE, H3K4me1, H3K4me3, H3K27me3, H3R17me2, H3AZAce) in breast cancer cell line MCF7 (GSE42617) [Tiling Array] [Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 (GPL4916) University of Chicago IGSB 2012-11-29 Homo sapiens
Homo sapiens		 6
(0 x 6) 		6 by_platform
by_series
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