Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(304)		   Primates
(0)		   Rodents
(246)		   Mammals
(18)		   Vertebrates
(11)		   Invertebrates
(39)		   Plants
(97)		   Bacteria
(50)		   Viruses
(0)		   Phages
(0)		   Unclassified
(3)		   All
(769)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(102)		   Tiling Array
(14)		   cDNA Array
(21)		   Oligo Array
(43)		   Bead Array
(92)		   Protein Array
(0)		   Antibody
(5)		   RT-PCR
(0)		   HT-Seq
(27)		   Other
(0)		   All
(304)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Affymetrix 6.0 study of sporadic motor neuron disease patients and controls. (GSE15826) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of Sydney 2009-04-25 Homo sapiens
Homo sapiens		 308,450,216
(1,880,794 x 164) 		71 88 1 4 by_platform
by_series
2 High-resolution genome-wide copy number analysis of pre-invasive mucinous ovarian tumours (GSE39076) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Peter MacCallum Cancer Centre 2012-07-03 Homo sapiens
Homo sapiens		 203,125,752
(1,880,794 x 108) 		108 by_platform
by_series
3 Identification of Novel Oncogene Loci in Ovarian Cancer through Integrated Copy Number and Expression Analysis (GSE19539) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Peter MacCallum Cancer Centre 2009-12-17 Homo sapiens
Homo sapiens		 135,417,168
(1,880,794 x 72) 		72 by_platform
by_series
4 Copy number data from paired primary and relapse ovarian tumours (GSE38787) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) PeterMacCallum Cancer Centre 2012-06-18 Homo sapiens
Homo sapiens		 126,013,198
(1,880,794 x 67) 		1 4 32 1 1 28 by_platform
by_series
5 The response to ionizing radiation at the exon level (GSE26841) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) Peter MacCallum Cancer Centre 2011-01-24 Homo sapiens
Homo sapiens		 41,833,308
(316,919 x 132) 		60 72 by_platform
by_series
6 DNA repair genes: Alternative transcription and gene expression at the exon level in response to the DNA damaging agent, ionizing radiation (GSE41840) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) Peter MacCallum Cancer Centre 2012-10-25 Homo sapiens
Homo sapiens		 41,833,308
(316,919 x 132) 		60 72 by_platform
by_series
7 *to be updated (GSE18876) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) University Of Western Australia 2009-11-03 Homo sapiens
Homo sapiens		 31,058,062
(316,919 x 98) 		98 by_platform
by_series
8 Genome-wide analysis of melanoma cell lines using high-density single-nucleotide polymorphism arrays. (GSE9003) [Oligo Array] Sentrix BeadChip Array HumanHap300 Genotyping BeadChip 317K, TagSNP Phase I, v1.1 (GPL5711) QIMR 2007-09-10 Homo sapiens
Homo sapiens		 24,130,228
(317,503 x 76) 		76 by_platform
by_series
9 Methylation data from CD4+ cells at birth and 12 months from a cohort of children who were diagnosed with IgE food allergy to either egg milk or peanut at 12 months (n=12) and healthy controls (n=12). (GSE34639) [Bead Array] Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) (GPL13534) Murdoch Childrens Research Institute 2011-12-21 Homo sapiens
Homo sapiens		 23,307,696
(485,577 x 48) 		48 by_platform
by_series
10 Exon arrays from HeLa cells transfected with GFP-ZRANB2 vector (GSE32932) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) University of Sydney 2011-10-12 Homo sapiens
Homo sapiens		 21,482,325
(1,432,155 x 15) 		15 by_platform
by_series
11 Exon arrays from HeLa cells transfected with RBM4-specific siRNA (GSE32933) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) University of Sydney 2011-10-12 Homo sapiens
Homo sapiens		 17,185,860
(1,432,155 x 12) 		12 by_platform
by_series
12 Expression profile of ovarian tumour samples (GSE9899) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) PeterMacCallum Cancer Centre 2007-12-14 Homo sapiens
Homo sapiens		 16,129,125
(54,675 x 295) 		295 by_platform
by_series
13 Expression data from 290 primary colorectal cancers (GSE14333) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Ludwig Institute for Cancer Research 2009-01-08 Homo sapiens
Homo sapiens		 15,855,750
(54,675 x 290) 		290 by_platform
by_series
14 Expression profile of 285 ovarian tumour samples (GSE9891) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) PeterMacCallum Cancer Centre 2007-12-14 Homo sapiens
Homo sapiens		 15,582,375
(54,675 x 285) 		285 by_platform
by_series
15 Expression data from patients presenting with a first demyelinating event (early multiple sclerosis) (GSE19470) [GeneChip] Affymetrix Human Exon 1.0 ST Array [CDF: HuEx-1_0-st-v2,coreR3,A20071112,EP] (GPL9793) Walter and Eliza Hall Institute of Medical Research 2009-12-14 Homo sapiens
Homo sapiens		 14,846,524
(337,421 x 44) 		44 by_platform
by_series
16 Identification of copy number alterations associated with the progression of DCIS to Invasive Ductal Carcinoma (GSE31892) [GeneChip] Affymetrix OncoScanâ„¢ FFPE Express (GPL13270) Peter MacCallum Cancer Centre 2011-09-06 Homo sapiens
Homo sapiens		 13,860,294
(330,007 x 42) 		42 by_platform
by_series
17 Genome-wide copy number variation in TP53 mutation negative ovarian tumours (GSE19416) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Peter MacCallum Cancer Centre 2009-12-10 Homo sapiens
Homo sapiens		 13,165,558
(1,880,794 x 7) 		7 by_platform
by_series
18 Subtypes of familial breast tumors revealed by expression and copy number profiling (GSE19177) [Bead Array] Illumina HumanCNV370-Duov1 DNA Analysis BeadChip (HumanCNV370v1) (GPL6986) Queensland Centre for Medical Genomics 2009-11-25 Homo sapiens
Homo sapiens		 12,593,736
(370,404 x 34) 		34 by_platform
by_series
19 Genomic Profiling of NHL Entities (GSE22082) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Griffith University 2010-06-01 Homo sapiens
Homo sapiens		 12,157,278
(238,378 x 51) 		11 40 by_platform
by_series
20 Dominant MLH1 epimutation linked to 5'UTR variant c.-27C>A (GSE30348) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of New South Wales 2011-06-30 Homo sapiens
Homo sapiens		 9,403,970
(1,880,794 x 5) 		5 by_platform
by_series
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