Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(765)		   Primates
(7)		   Rodents
(755)		   Mammals
(22)		   Vertebrates
(41)		   Invertebrates
(86)		   Plants
(460)		   Bacteria
(149)		   Viruses
(1)		   Phages
(0)		   Unclassified
(6)		   All
(2,292)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(311)		   Tiling Array
(67)		   cDNA Array
(45)		   Oligo Array
(295)		   Bead Array
(24)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(5)		   HT-Seq
(15)		   Other
(1)		   All
(765)		  
1   |   2   |   3   |   4   |   5      »      [39]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Definitive SNP/CNV haplotype map of Asians determined using a collection of complete hydatidiform moles (Affymetrix) (GSE18642) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Kyushu University 2009-10-20 Homo sapiens
Homo sapiens		 188,079,400
(1,880,794 x 100) 		100 by_platform
by_series
2 Definitive SNP/CNV haplotype map of Asians determined using a collection of complete hydatidiform moles (GSE18701) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Kyushu University 2009-10-22 Homo sapiens
Homo sapiens		 188,079,400
(1,880,794 x 100) 		100 by_platform
by_series
3 An eQTL study in the Japanese population [genotype] (GSE42487) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) National Center of Neurology and Psychiatry 2012-11-26 Homo sapiens
Homo sapiens		 86,671,844
(1,140,419 x 76) 		76 by_platform
by_series
4 Identification of single nucleotide polymorphisms regulating peripheral blood mRNA expression with genome-wide significance: an eQTL study in the Japanese population (GSE42488) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) National Center of Neurology and Psychiatry 2012-11-26 Homo sapiens
Homo sapiens		 86,671,844
(1,140,419 x 76) 		76 by_platform
by_series
5 SNP data from Neuroblastoma samples (GSE12494) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of Tokyo 2008-08-19 Homo sapiens
Homo sapiens		 62,698,782
(262,338 x 239) 		239 by_platform
by_series
6 SNP data from lymphoma samples (GSE12906) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of Tokyo 2008-09-23 Homo sapiens
Homo sapiens		 56,927,346
(262,338 x 217) 		217 by_platform
by_series
7 Overexpression of NUCKS1 in colorectal cancer correlates with recurrence after curative surgery (copy number analysis) (GSE27910) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Tokyo Medical and Dental University 2011-03-11 Homo sapiens
Homo sapiens		 46,722,088
(238,378 x 196) 		196 by_platform
by_series
8 Overexpression of NUCKS1 in colorectal cancer correlates with recurrence after curative surgery (GSE27913) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Tokyo Medical and Dental University 2011-03-11 Homo sapiens
Homo sapiens		 46,722,088
(238,378 x 196) 		196 by_platform
by_series
9 Affymetrix SNP array data for acute T-cell leukemia/lymphoma (ATL) (GSE33602) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of Tokyo 2011-11-09 Homo sapiens
Homo sapiens		 44,072,784
(262,338 x 168) 		168 by_platform
by_series
10 SNP data of MPD/MPN samples (GSE19647) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of Tokyo 2009-12-24 Homo sapiens
Homo sapiens		 29,644,194
(262,338 x 113) 		37 76 by_platform
by_series
11 Definitive haplotypes from a collection of complete hydatidiform moles (CHMs) (GSE12713) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) Kyushu University 2008-09-09 Homo sapiens
Homo sapiens		 26,233,800
(262,338 x 100) 		100 by_platform
by_series
12 Definitive haplotypes from a collection of complete hydatidiform moles (CHMs) (GSE12713) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Kyushu University 2008-09-09 Homo sapiens
Homo sapiens		 23,837,800
(238,378 x 100) 		100 by_platform
by_series
13 Expression data of HUVEC cells after TNF-alpha treatment (GSE9036) [Tiling Array] Tiling Array for TNFa induced genes (GPL5828) The University of Tokyo 2007-09-13 Homo sapiens
Homo sapiens		 21,421,120
(267,764 x 80) 		80 by_platform
by_series
14 Affymetrix SNP array data for Japanese schizophrenia samples (GSE27923) [GeneChip] [CentXbaAv2] Affymetrix Human CentXbaAv2 SNP Array (GPL13284) RIKEN Brain Science Institute 2011-03-13 Homo sapiens
Homo sapiens		 20,183,130
(59,015 x 342) 		342 by_platform
by_series
15 Affymetrix SNP array data for Japanese schizophrenia samples (GSE27923) [GeneChip] [CentHindAv2] Affymetrix Human CentHindAv2 SNP Array (GPL13283) RIKEN Brain Science Institute 2011-03-13 Homo sapiens
Homo sapiens		 18,851,371
(57,299 x 329) 		329 by_platform
by_series
16 SNP chip data of CML, resistant with tyrosine kinase inhibitor (GSE18964) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of Tokyo 2009-11-10 Homo sapiens
Homo sapiens		 17,314,308
(262,338 x 66) 		66 by_platform
by_series
17 Affymetrix SNP array data for myelodysplastic syndromes (MDS) and related neoplasms (GSE31174) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of Tokyo 2011-08-03 Homo sapiens
Homo sapiens		 15,215,604
(262,338 x 58) 		58 by_platform
by_series
18 Array CGH analysis of human colorectal tumors (GSE35476) [Oligo Array] Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version) (GPL10123) Sapporo medical university 2012-02-01 Homo sapiens
Homo sapiens		 15,193,920
(180,880 x 84) 		84 by_platform
by_series
19 Genome-wide copy number aberrations and methylation profiles in human colorectal lesions (GSE35534) [Oligo Array] Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version) (GPL10123) Sapporo medical university 2012-02-03 Homo sapiens
Homo sapiens		 15,193,920
(180,880 x 84) 		84 by_platform
by_series
20 Genome-wide copy number analysis for occult lymph node metastasis in oral squamous cell carcinoma (GSE31984) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Tokyo Medical and Dental University 2011-09-08 Homo sapiens
Homo sapiens		 14,302,680
(238,378 x 60) 		60 by_platform
by_series
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