Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(72)
  Primates
(0)
  Rodents
(114)
  Mammals
(3)
  Vertebrates
(1)
  Invertebrates
(5)
  Plants
(44)
  Bacteria
(15)
  Viruses
(1)
  Phages
(0)
  Unclassified
(0)
  All
(255)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(48)
  Tiling Array
(1)
  cDNA Array
(8)
  Oligo Array
(13)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(72)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Human 32 MPSS samples (GSE1747) [MPSS] Massively Parallel Signature Sequencing - MPSS (classic method) (GPL1443) Lynx Therapeutics, Inc. 2004-09-10 Homo sapiens
Homo sapiens
12,533,408
(391,669 x 32)
9 4 4 1 3 2 2 6 1 by_platform
by_series
2 Rosetta_Merck_CEPH_Study (GSE1726) [Oligo Array] Rosetta (Merck) Blood donor experiment (GPL564) University of Colorado Denver 2004-09-03 Homo sapiens
Homo sapiens
3,993,972
(23,916 x 167)
167 by_platform
by_series
3 Normal Variance of Gene Expression in the Human Lung (GSE1643) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) University of Colorado School of Medicine 2004-08-05 Homo sapiens
Homo sapiens
2,187,000
(54,675 x 40)
40 by_platform
by_series
4 Toxicity from radiation therapy associated with abnormal transcriptional responses to DNA damage (GSE1725) [GeneChip] [HG_U95Av2] Affymetrix Human Genome U95 Version 2 Array (GPL8300) Stanford University School of Medicine 2004-09-02 Homo sapiens
Homo sapiens
2,158,875
(12,625 x 171)
171 by_platform
by_series
5 Prediction of toxicant-specific gene expression signatures following chemotherapeutic treatment of breast cell lines (GSE1647) [Oligo Array] UNC compugen oligo array for toxgenomics study (GPL550) University of North Carolina at Chapel Hill 2004-08-05 Homo sapiens
Homo sapiens
1,673,529
(20,163 x 83)
83 by_platform
by_series
6 Primary human umbilical vein and arterial endothelial cells (GSE1539) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) National Tsing Hua University 2004-07-02 Homo sapiens
Homo sapiens
1,602,902
(801,451 x 2)
2 by_platform
by_series
7 Expression profile of pancreatic ductal cells (GSE1542) [GeneChip] [HG-U133B] Affymetrix Human Genome U133B Array (GPL97) Jichi Medical University 2004-07-06 Homo sapiens
Homo sapiens
1,109,605
(22,645 x 49)
49 by_platform
by_series
8 Expression profile of pancreatic ductal cells (GSE1542) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Jichi Medical University 2004-07-06 Homo sapiens
Homo sapiens
1,091,867
(22,283 x 49)
49 by_platform
by_series
9 EORTC 10994 clinical trial (GSE1561) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Bordeaux University 2004-07-14 Homo sapiens
Homo sapiens
1,091,867
(22,283 x 49)
49 by_platform
by_series
10 Expression profiling in inflammatory bowel disease (GSE1710) [cDNA Array] Human UniGene Set RZPD 1 (GPL284) University Clinic of Schleswig Holstein 2004-08-27 Homo sapiens
Homo sapiens
1,071,360
(34,560 x 31)
31 by_platform
by_series
11 Gene expression profile of acute myeloid leukemia (GSE1729) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) University Hospital 2004-09-06 Homo sapiens
Homo sapiens
958,169
(22,283 x 43)
43 by_platform
by_series
12 De novo kidney transplantation without use of calcineurin inhibitors preserves renal structure and function (GSE1743) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) The Scripps Research Institute 2004-09-09 Homo sapiens
Homo sapiens
913,603
(22,283 x 41)
41 by_platform
by_series
13 Kidney Transplant Rejection and Tissue Injury by Gene Profiling of Biopsies and Peripheral Blood Lymphocytes (GSE1563) [GeneChip] [HG_U95Av2] Affymetrix Human Genome U95 Version 2 Array (GPL8300) The Scripps Research Institute 2004-07-14 Homo sapiens
Homo sapiens
782,750
(12,625 x 62)
31 31 by_platform
by_series
14 Human blood expression for Huntington's disease versus control (GSE1751) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) MassGeneral Institute for Neurodegeneration 2004-09-13 Homo sapiens
Homo sapiens
690,773
(22,283 x 31)
31 by_platform
by_series
15 COPD Study (GSE1650) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Boston University Medical Center 2004-08-06 Homo sapiens
Homo sapiens
668,490
(22,283 x 30)
30 by_platform
by_series
16 T-ALL and T-lymphoblastic lymphoma (GSE1577) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Mount Sinai School of Medicine 2004-07-20 Homo sapiens
Homo sapiens
646,207
(22,283 x 29)
29 by_platform
by_series
17 Human blood expression for Huntington's disease versus control, Codelink (GSE1767) [Oligo Array] GE Codelink Human Uniset I, II, and 20K (GPL1449) MassGeneral Institute for Neurodegeneration 2004-09-15 Homo sapiens
Homo sapiens
616,311
(19,881 x 31)
31 by_platform
by_series
18 ENCODE: GWLA of TAF1, RNA PolII binding in four cell lines (GSE1778) [Tiling Array] RenLab ENCODE PCR tiling array (GPL1454) Ludwig Institute for Cancer Research 2004-09-17 Homo sapiens
Homo sapiens
609,408
(25,392 x 24)
6 6 6 6 by_platform
by_series
19 TAcKLE - Transcriptome Amplification and cDNA Labeling for Expression analysis (GSE1645) [Oligo Array] DKFZ Operon 27k long oligonucleotide array (GPL1384) German Cancer Research Center (DKFZ) 2004-08-05 Homo sapiens
Homo sapiens
552,960
(27,648 x 20)
15 5 by_platform
by_series
20 Adipocyte Differentiation (GSE1657) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Whitehead Instute - MIT 2004-08-10 Homo sapiens
Homo sapiens
534,792
(22,283 x 24)
24 by_platform
by_series
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