Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(67)

Viruses
(0)

Phages
(0)

Unclassified
(8)

All
(275)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(0)

Other
(0)

All
(67)

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	Platform ID	Title	Number of the probes	Institute	Submission date	Manufacturer	Species	Platform class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GPL4499	Human whole genome tiling array, chip 11 of 14	3,317,284	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 11 of 14,
2	GPL4496	Human whole genome tiling array, chip 08 of 14	3,316,927	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 08 of 14,
3	GPL4495	Human whole genome tiling array, chip 07 of 14	3,207,896	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 07 of 14,
4	GPL4500	Human whole genome tiling array, chip 12 of 14	3,201,270	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 12 of 14,
5	GPL4502	Human whole genome tiling array, chip 13 of 14	3,161,722	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 13 of 14,
6	GPL4490	Human whole genome tiling array, chip 02 of 14	3,121,530	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 02 of 14,
7	GPL4493	Human whole genome tiling array, chip 05 of 14	3,110,356	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 05 of 14,
8	GPL4489	Human whole genome tiling array, chip 01 of 14	3,012,992	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 01 of 14,
9	GPL4497	Human whole genome tiling array, chip 09 of 14	2,995,629	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 09 of 14,
10	GPL4494	Human whole genome tiling array, chip 06 of 14	2,962,602	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 06 of 14,
11	GPL4492	Human whole genome tiling array, chip 04 of 14	2,960,773	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 04 of 14,
12	GPL4491	Human whole genome tiling array, chip 03 of 14	2,924,606	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 03 of 14,
13	GPL4498	Human whole genome tiling array, chip 10 of 14	2,911,857	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 10 of 14,
14	GPL4503	Human whole genome tiling array, chip 14 of 14	1,762,422	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 14 of 14,
15	GPL4559	ENCODE NimbleGen hg17 tiling array	391,015	Ludwig Institute for Cancer Research	2006-11-14	NimbleGen Systems Inc.	Homo sapiens	Tiling Array	in situ oligonucleotide, ENCODE NimbleGen hg17 tiling array, 391K element tiling array based on NCBI35 build of the human genome (hg17) and contains overlapping 50-mer oligonucleotides, positioned at every 38 basepairs (bp) throughout the ENCODE regions.
16	GPL4558	ENCODE NimbleGen hg16 tiling array	388,570	Ludwig Institute for Cancer Research	2006-11-13	NimbleGen Systems Inc.	Homo sapiens	Tiling Array	in situ oligonucleotide, ENCODE NimbleGen hg16 tiling array, 388K element tiling array based on NCBI34 build of the human genome (hg16) and contains overlapping 50-mer oligonucleotides, positioned at every 38 basepairs (bp) throughout the ENCODE regions.
17	GPL4600	DFCI_FISHER_HUMAN_Build35_HG17_388K_v1.0	388,222	UCSF	2006-11-28	NimbleGen Systems Inc.	Homo sapiens	Oligo Array	in situ oligonucleotide, DFCI_FISHER_HUMAN_Build35_HG17_388K_v1.0, Chromosome coordinates are based on the Build 35 HG17, May 2004 release.
18	GPL4704	Nimblegen Human 5K promoter array 1	384,877	OSU Medical Center	2006-12-28	Nimblegen Systems	Homo sapiens	Oligo Array	in situ oligonucleotide, Nimblegen Human 5K promoter array 1,
19	GPL4599	NimbleGen_1500b_Promoter_Array	359,384	OSU Medical Center	2006-11-28	NimbleGen Systems Inc	Homo sapiens	Oligo Array	in situ oligonucleotide, NimbleGen_1500b_Promoter_Array,
20	GPL4544	Agilent-014584 Human Genome 244K CGH Microarray (Alpha Test)	243,504	Agilent Technologies	2006-11-09	Agilent Technologies	Homo sapiens	Oligo Array	in situ oligonucleotide, Agilent-014584 Human Genome 244K CGH Microarray (Alpha Test), Alpha test array -- final design is Agilent-014693, P/N G4411B. Arrays of this design have barcodes that begin with 16014584 or 2514584. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

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