Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(545)		   Primates
(8)		   Rodents
(358)		   Mammals
(33)		   Vertebrates
(31)		   Invertebrates
(73)		   Plants
(201)		   Bacteria
(116)		   Viruses
(0)		   Phages
(0)		   Unclassified
(9)		   All
(1,376)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(228)		   Tiling Array
(141)		   cDNA Array
(32)		   Oligo Array
(100)		   Bead Array
(29)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(0)		   HT-Seq
(11)		   Other
(1)		   All
(545)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Exon Array expression data from 13 areas of the late second trimester human brain (GSE13344) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Yale University School of Medicine 2008-10-24 Homo sapiens
Homo sapiens		 136,054,725
(1,432,155 x 95) 		95 by_platform
by_series
2 High-resolution mapping of copy-number alterations with massively parallel sequencing (GSE13372) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of North Carolina 2008-10-27 Homo sapiens
Homo sapiens		 127,893,992
(1,880,794 x 68) 		33 1 34 by_platform
by_series
3 Mapping of copy-number alterations with massively parallel sequencing (GSE13373) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of North Carolina 2008-10-27 Homo sapiens
Homo sapiens		 127,893,992
(1,880,794 x 68) 		33 1 34 by_platform
by_series
4 Microarray Innovations in LEukemia (MILE) study: Stage 1 data (GSE13159) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Roche Molecular Systems 2008-10-10 Homo sapiens
Homo sapiens		 114,598,800
(54,675 x 2,096) 		2,096 by_platform
by_series
5 Microarray Innovations in LEukemia (MILE) study (GSE13204) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Roche Molecular Systems 2008-10-15 Homo sapiens
Homo sapiens		 114,598,800
(54,675 x 2,096) 		2,096 by_platform
by_series
6 Genotyping data from 120 trios with unexplained mental retardation (GSE13117) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) Radboud University Nijmegen Medical Centre 2008-10-08 Homo sapiens
Homo sapiens		 104,672,862
(262,338 x 399) 		399 by_platform
by_series
7 Gene expression and alternative splicing in human gastric cancer (GSE13195) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Shanghai shbiochip co 2008-10-14 Homo sapiens
Homo sapiens		 71,607,750
(1,432,155 x 50) 		50 by_platform
by_series
8 Mapping of copy-number alterations with massively parallel sequencing (GSE13373) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) University of North Carolina 2008-10-27 Homo sapiens
Homo sapiens		 53,635,050
(238,378 x 225) 		105 1 119 by_platform
by_series
9 Genotyping data from 120 trios with unexplained mental retardation (GSE13117) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Radboud University Nijmegen Medical Centre 2008-10-08 Homo sapiens
Homo sapiens		 51,966,404
(238,378 x 218) 		218 by_platform
by_series
10 Exon Array expression data from 13 areas of the late second trimester human brain (GSE13344) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) Yale University School of Medicine 2008-10-24 Homo sapiens
Homo sapiens		 30,107,305
(316,919 x 95) 		95 by_platform
by_series
11 Gene Expression and Isoform Variation: Exon-level Analysis (GSE13069) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) McGill University 2008-10-06 Homo sapiens
Homo sapiens		 28,643,100
(1,432,155 x 20) 		15 5 by_platform
by_series
12 Gene Expression and Isoform Variation Analysis using Affymetrix Exon Arrays (GSE13072) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) McGill University 2008-10-06 Homo sapiens
Homo sapiens		 28,643,100
(1,432,155 x 20) 		15 5 by_platform
by_series
13 Human Insulin Resistance and Thiazolidinedione-Mediated Insulin Sensitization (GSE13070) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) UCSD 2008-10-06 Homo sapiens
Homo sapiens		 19,901,700
(54,675 x 364) 		84 280 by_platform
by_series
14 Identification of candidate predisposing copy number variants in familial and early-onset colorectal cancer patients (GSE13429) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Radboud University Nijmegen Medical Centre 2008-10-31 Homo sapiens
Homo sapiens		 18,807,940
(1,880,794 x 10) 		10 by_platform
by_series
15 Prognostic analysis of mantle cell lymphoma genomes (GSE13331) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) BC Cancer Research Centre 2008-10-23 Homo sapiens
Homo sapiens		 18,663,471
(6,221,157 x 3) 		3 by_platform
by_series
16 Genotype profiling of primitive neuroectodermal tumours (250K_Nsp_SNP and 250K_Sty_SNP) (GSE14087) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) Hospital for Sick Children 2008-12-22 Homo sapiens
Homo sapiens		 17,576,646
(262,338 x 67) 		67 by_platform
by_series
17 Global Chromatin Modifications at Enhancers Correlate with Cell Type-Specific Gene Expression in the Human Genome (GSE14083) [Oligo Array] Condensed array spanning predicted enhancers in HeLa cells. This is set 02 of 3 (GPL7819) University of California, San Diego 2008-12-21 Homo sapiens
Homo sapiens		 16,856,125
(732,875 x 23) 		23 by_platform
by_series
18 Global Chromatin Modifications at Enhancers Correlate with Cell Type-Specific Gene Expression in the Human Genome (GSE14083) [Oligo Array] Condensed array spanning predicted enhancers in HeLa cells. This is set 03 of 3 (GPL7820) University of California, San Diego 2008-12-21 Homo sapiens
Homo sapiens		 16,855,481
(732,847 x 23) 		23 by_platform
by_series
19 Global Chromatin Modifications at Enhancers Correlate with Cell Type-Specific Gene Expression in the Human Genome (GSE14083) [Oligo Array] Condensed array spanning predicted enhancers in HeLa cells. This is set 01 of 3 (GPL7818) University of California, San Diego 2008-12-21 Homo sapiens
Homo sapiens		 16,854,285
(732,795 x 23) 		23 by_platform
by_series
20 Genotype profiling of primitive neuroectodermal tumours (250K_Nsp_SNP and 250K_Sty_SNP) (GSE14087) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Hospital for Sick Children 2008-12-22 Homo sapiens
Homo sapiens		 15,971,326
(238,378 x 67) 		67 by_platform
by_series
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