Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(813)		   Primates
(7)		   Rodents
(808)		   Mammals
(22)		   Vertebrates
(41)		   Invertebrates
(88)		   Plants
(473)		   Bacteria
(149)		   Viruses
(1)		   Phages
(0)		   Unclassified
(6)		   All
(2,408)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(334)		   Tiling Array
(68)		   cDNA Array
(47)		   Oligo Array
(316)		   Bead Array
(24)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(6)		   HT-Seq
(15)		   Other
(1)		   All
(813)		  
1   |   2   |   3   |   4   |   5      »      [41]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression data from immortalized human lung small airway epithelial cells (GSE47436) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) National Cancer Center 2013-05-28 Homo sapiens
Homo sapiens		 328,050
(54,675 x 6) 		6 by_platform
by_series
2 Gene expression alterations in human colon cancer xenograft treated with anti-VEGF antibody (GSE47087) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Hamamatsu University School of Medicine 2013-05-20 Homo sapiens
Homo sapiens		 199,782
(33,297 x 6) 		6 by_platform
by_series
3 Hela SPAG4 siRNA (GSE46054) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Research Center for Advanced Science and Technology 2013-04-15 Homo sapiens
Homo sapiens		 328,050
(54,675 x 6) 		6 by_platform
by_series
4 Plasma miRNA Expression Profiling Using Human TaqMan Low Density Array Cards (GSE46012) [RT-PCR] Applied Biosystems Human Taqman MicroRNA Array v3.0 (GPL11316) Kyoto University 2013-04-12 Homo sapiens
Homo sapiens		 4,608
(768 x 6) 		1 5 by_platform
by_series
5 Expression data (U133 Plus 2.0) from fibroblast like synoviocytes from patients with rheumatoid arthritis (RA-FLS) stimulated by DcR3 (GSE45665) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Kobe University Graduate School of Medicine 2013-04-01 Homo sapiens
Homo sapiens		 437,400
(54,675 x 8) 		8 by_platform
by_series
6 Expression data from CD44-knockdown MDA-MB-231 human breast cancer cells. (GSE45613) [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version) (GPL10332) Matsumoto Dental University 2013-03-28 Homo sapiens
Homo sapiens		 135,660
(45,220 x 3) 		3 by_platform
by_series
7 DNA microarray analysis for HepG2 cells exposed to wastewater effluents (GSE45605) [GeneChip] [HG-Focus] Affymetrix Human HG-Focus Target Array (GPL201) Hokkaido University 2013-03-28 Homo sapiens
Homo sapiens		 123,102
(8,793 x 14) 		14 by_platform
by_series
8 Transcriptome changes in spliceostatin A treated cells (GSE45379) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) University of Toyama 2013-03-21 Homo sapiens
Homo sapiens		 8,592,930
(1,432,155 x 6) 		6 by_platform
by_series
9 Expression data from Disulfiram or 5-FU treated EpCAM-negative non-tumor-initiating hepatocellular carcinoma (HCC) cells. (GSE45224) [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version) (GPL13497) Graduate School of Medicine, Chiba University 2013-03-15 Homo sapiens
Homo sapiens		 205,104
(34,184 x 6) 		6 by_platform
by_series
10 Searching for human genes whose expression is controlled by nuclear paraspeckle (GSE45158) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) AIST 2013-03-14 Homo sapiens
Homo sapiens		 271,320
(45,220 x 6) 		6 by_platform
by_series
11 Expression data from High-grade prostate cancer cells (GSE45016) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Kochi University 2013-03-11 Homo sapiens
Homo sapiens		 601,425
(54,675 x 11) 		11 by_platform
by_series
12 Gene expression profile in CD14+ monocytes in patients with SSc or healthy controls (part 1) (GSE44996) [cDNA Array] Oligo GEArray Human Extracellular Matrix and Adhesion Molecules Microarray OHS-013 (GPL9425) Keio University School of Med 2013-03-11 Homo sapiens
Homo sapiens		 512
(128 x 4) 		4 by_platform
by_series
13 Gene expression profile in CD14+ monocytes in patients with SSc or healthy controls (GSE44999) [cDNA Array] Oligo GEArray Human Extracellular Matrix and Adhesion Molecules Microarray OHS-013 (GPL9425) Keio University School of Med 2013-03-11 Homo sapiens
Homo sapiens		 512
(128 x 4) 		4 by_platform
by_series
14 Gene expression profile in CD14+ monocytes in patients with SSc or healthy controls (part 2) (GSE44997) [cDNA Array] Oligo GEArray for Human Endothelial Biology (GPL16772) Keio University School of Med 2013-03-11 Homo sapiens
Homo sapiens		 456
(114 x 4) 		4 by_platform
by_series
15 Gene expression profile in CD14+ monocytes in patients with SSc or healthy controls (GSE44999) [cDNA Array] Oligo GEArray for Human Endothelial Biology (GPL16772) Keio University School of Med 2013-03-11 Homo sapiens
Homo sapiens		 456
(114 x 4) 		4 by_platform
by_series
16 Gene expression profile in CD14+ monocytes in patients with SSc or healthy controls (part 3) (GSE44998) [cDNA Array] Oligo GEArray for Human Chemokine & Receptors (GPL16773) Keio University School of Med 2013-03-11 Homo sapiens
Homo sapiens		 452
(113 x 4) 		4 by_platform
by_series
17 Gene expression profile in CD14+ monocytes in patients with SSc or healthy controls (GSE44999) [cDNA Array] Oligo GEArray for Human Chemokine & Receptors (GPL16773) Keio University School of Med 2013-03-11 Homo sapiens
Homo sapiens		 452
(113 x 4) 		4 by_platform
by_series
18 Microarray analysis of the leukocyte global gene expression profile following lithium treatment (GSE44987) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Univ of Tokushima 2013-03-08 Homo sapiens
Homo sapiens		 180,880
(45,220 x 4) 		4 by_platform
by_series
19 Affymetrix SNP array data for xenografted transient abnormal myelopoiesis samples (GSE44739) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of Tokyo 2013-02-28 Homo sapiens
Homo sapiens		 11,018,196
(262,338 x 42) 		42 by_platform
by_series
20 Comparative study of deoxynivalenol and 15-acetyldeoxynivalenol on gene expression in the human cell line Caco-2 (GSE44716) [Oligo Array] Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version) (GPL14550) Kirin Company, Limited 2013-02-27 Homo sapiens
Homo sapiens		 340,360
(42,545 x 8) 		8 by_platform
by_series
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