Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(279)
  Primates
(0)
  Rodents
(126)
  Mammals
(16)
  Vertebrates
(9)
  Invertebrates
(19)
  Plants
(87)
  Bacteria
(50)
  Viruses
(0)
  Phages
(0)
  Unclassified
(6)
  All
(592)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(49)
  Tiling Array
(0)
  cDNA Array
(26)
  Oligo Array
(101)
  Bead Array
(73)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(30)
  Other
(0)
  All
(279)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Dysregulation of miRNA in adenocarcinoma of the uterine cervix (GSE55478) [Oligo Array] Agilent-041686 Unrestricted Human miRNA Microarray (miRNA ID version) (GPL18358) CHA university, CHA Bundang Medical Center 2014-02-28 Homo sapiens
Homo sapiens
15,096
(1,887 x 8)
8 by_platform
by_series
2 Gene expression in human hepatocellular carcinoma (GSE55039) [cDNA Array] KRIBB_Human_25K (GPL18290) Korea Institute of Oriental Medicine 2014-02-14 Homo sapiens
Homo sapiens
3,635,170
(23,605 x 154)
154 by_platform
by_series
3 microRNA expressions in gastric cancer (GSE54397) [Oligo Array] Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray 030840 (Probe Name version) (GPL15159) NAR Center, Inc. 2014-01-24 Homo sapiens
Homo sapiens
113,440
(3,545 x 32)
32 by_platform
by_series
4 2',3,5-Trimethoxychalcone (MC-23)-induced gene expression in MiaPaCa2 cells (GSE54225) [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version) (GPL13497) Konkuk University 2014-01-20 Homo sapiens
Homo sapiens
136,736
(34,184 x 4)
4 by_platform
by_series
5 Intratumoral heterogeneity of prostate cancers (GSE54185) [Oligo Array] Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version) (GPL10123) The Catholic University of Korea, College of Medicine 2014-01-17 Homo sapiens
Homo sapiens
2,170,560
(180,880 x 12)
12 by_platform
by_series
6 Poly(A) tail length change of miRNA targets in HeLa cells (GSE54114) [HT Sequencing] Illumina HiSeq 2500 (Homo sapiens) (GPL16791) Seoul National University 2014-01-15 Homo sapiens
Homo sapiens
4
(0 x 4)
4 by_platform
by_series
7 miRNA expression profiles in the 19 candidate urines (prostate cancer, CaP, patients and non-cancer subjects with benign prostatic hyperplasia, BPH) (GSE54010) [Oligo Array] Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray 030840 (Probe Name version) (GPL15159) NAR Center, Inc. 2014-01-13 Homo sapiens
Homo sapiens
67,355
(3,545 x 19)
5 14 by_platform
by_series
8 Genetic differences underlying chromatin discordance between monozygotic twins [expression profile] (GSE53822) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) KCDC 2014-01-06 Homo sapiens
Homo sapiens
3,400,632
(47,231 x 72)
72 by_platform
by_series
9 Genetic differences underlying chromatin discordance between monozygotic twins (GSE53823) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) KCDC 2014-01-06 Homo sapiens
Homo sapiens
3,400,632
(47,231 x 72)
72 by_platform
by_series
10 Genetic differences underlying chromatin discordance between monozygotic twins (GSE53823) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) KCDC 2014-01-06 Homo sapiens
Homo sapiens
72
(0 x 72)
72 by_platform
by_series
11 Hypoxic conditioned medium from human amniotic fluid-derived mesenchymal stem cells accelerates skin wound healing through TGF-ß/SMAD and PI3K/Akt pathways (GSE53402) [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version) (GPL13497) Korea University 2013-12-17 Homo sapiens
Homo sapiens
68,368
(34,184 x 2)
2 by_platform
by_series
12 Comparison of microRNA expression with whole blood between ER positive breast cancer patients and normal controls (GSE53179) [Oligo Array] Agilent-026867 Human miRNA Microarray_Hsa_Rel14_V5 (Probe Name version) (GPL16550) National cancer center, Korea 2013-12-10 Homo sapiens
Homo sapiens
42,768
(2,673 x 16)
16 by_platform
by_series
13 Knockdown of EI24 in ZR-75-1 cells (GSE52508) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Yonsei University 2013-11-19 Homo sapiens
Homo sapiens
266,376
(33,297 x 8)
8 by_platform
by_series
14 Global analyses of the effect of different cellular contexts on microRNA targeting (GSE52531) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) Hanyang University 2013-11-19 Homo sapiens
Homo sapiens
16
(0 x 16)
7 1 7 1 by_platform
by_series
15 Global analyses of the effect of different cellular contexts on microRNA targeting (RNA-Seq) (GSE52530) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) Hanyang University 2013-11-19 Homo sapiens
Homo sapiens
12
(0 x 12)
6 6 by_platform
by_series
16 Global analyses of the effect of different cellular contexts on microRNA targeting (RNA-Seq) (GSE52530) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) Hanyang University 2013-11-19 Homo sapiens
Homo sapiens
12
(0 x 12)
4 8 by_platform
by_series
17 Global analyses of the effect of different cellular contexts on microRNA targeting (GSE52531) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) Hanyang University 2013-11-19 Homo sapiens
Homo sapiens
12
(0 x 12)
4 8 by_platform
by_series
18 Global analyses of the effect of different cellular contexts on microRNA targeting (3P-Seq Human) (GSE52527) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) Hanyang University 2013-11-19 Homo sapiens
Homo sapiens
4
(0 x 4)
1 1 1 1 by_platform
by_series
19 Comparison of gene expression (hESC, PGC-like cell from hESC, SSC from testis) (GSE52302) [Oligo Array] Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version) (GPL13607) CHA University 2013-11-12 Homo sapiens
Homo sapiens
377,856
(62,976 x 6)
2 4 by_platform
by_series
20 mRNA microarray analysis on HepG2 cells exposed to amorphous Silica Nanoparticles (SiO2-NP) (GSE51276) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) University of Seoul 2013-09-30 Homo sapiens
Homo sapiens
66,594
(33,297 x 2)
2 by_platform
by_series
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