Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(205)		   Primates
(0)		   Rodents
(86)		   Mammals
(8)		   Vertebrates
(9)		   Invertebrates
(17)		   Plants
(67)		   Bacteria
(37)		   Viruses
(0)		   Phages
(0)		   Unclassified
(4)		   All
(433)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(39)		   Tiling Array
(0)		   cDNA Array
(25)		   Oligo Array
(75)		   Bead Array
(53)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(13)		   Other
(0)		   All
(205)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genetic differences underlying chromatin discordance between monozygotic twins (GSE44742) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) KCDC 2013-02-28 Homo sapiens
Homo sapiens		 72
(0 x 72) 		72 by_platform
by_series
2 DNA profiling of human normal colon tissues (GSE44300) [Oligo Array] Agilent-014950 Human Genome CGH Microarray 4x44K (Probe Name version) (GPL8841) Cancer Metastasis Research Center 2013-02-13 Homo sapiens
Homo sapiens		 1,775,587
(43,307 x 41) 		41 by_platform
by_series
3 Expression data from endometrial carcinoma cells (GSE43653) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) catholic university medical colleage 2013-01-22 Homo sapiens
Homo sapiens		 218,700
(54,675 x 4) 		4 by_platform
by_series
4 Expression of M-CSF from cryopreserved teeth-derived human periodontal ligament cells with different freezing protocols (GSE43611) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Kyung Hee University 2013-01-18 Homo sapiens
Homo sapiens		 135,660
(45,220 x 3) 		3 by_platform
by_series
5 miR-1061 and miR-591 are involved in paclitaxel-resistance and their regulation increases the sensitivity to paclitaxel (GSE43598) [Bead Array] Illumina Human v2 MicroRNA expression beadchip (GPL8179) CHA University 2013-01-17 Homo sapiens
Homo sapiens		 4,584
(1,146 x 4) 		4 by_platform
by_series
6 miR-1061 and miR-591 are involved in paclitaxel-resistance and their regulation increases the sensitivity to paclitaxel (GSE43598) [Bead Array] Illumina Human v1 MicroRNA expression beadchip (GPL8178) CHA University 2013-01-17 Homo sapiens
Homo sapiens		 735
(735 x 1) 		1 by_platform
by_series
7 Gene expression profiling of GFP-positive cancer stem-like cells(CSLC) derived from MDA-MB453 cells, compared with GFP-negative non-cancer stem cells (non-CSLC). (GSE43336) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) Seoul National University 2013-01-08 Homo sapiens
Homo sapiens		 188,924
(47,231 x 4) 		4 by_platform
by_series
8 Expression data of the parental and the induced radio-resistant colorectal cancer cell lines (GSE43206) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Cancer Research Institute 2012-12-30 Homo sapiens
Homo sapiens		 199,782
(33,297 x 6) 		6 by_platform
by_series
9 Variant acute promyelocytic leukemia (APL) bone marrow aCGH (GSE42984) [Oligo Array] Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version) (GPL10123) Asan Medical Center 2012-12-18 Homo sapiens
Homo sapiens		 180,880
(180,880 x 1) 		1 by_platform
by_series
10 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (gene expression) (GSE42669) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Samsung Medical Center 2012-12-02 Homo sapiens
Homo sapiens		 1,931,226
(33,297 x 58) 		58 by_platform
by_series
11 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (GSE42670) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Samsung Medical Center 2012-12-02 Homo sapiens
Homo sapiens		 1,931,226
(33,297 x 58) 		58 by_platform
by_series
12 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (GSE42670) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Samsung Medical Center 2012-12-02 Homo sapiens
Homo sapiens		 487,008
(243,504 x 2) 		1 1 by_platform
by_series
13 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (CGH) (GSE42577) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Samsung Medical Center 2012-11-28 Homo sapiens
Homo sapiens		 487,008
(243,504 x 2) 		1 1 by_platform
by_series
14 Alkaline Phosphatase ALPPL2 is a novel pancreatic carcinoma-associated protein (GSE42429) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens		 405,297
(45,033 x 9) 		9 by_platform
by_series
15 Expression analysis of human pancreatic cancer cell lines (Capan-1, Panc-1, Panc-1+ve and Panc-1-ve) and pancreatic ductal cell line (HPDE) (GSE42428) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens		 225,165
(45,033 x 5) 		5 by_platform
by_series
16 Expression analysis of RNAi mediated ALPPL2 knockdown in ALPPL2 expressing Panc-1 cells (Panc-1+ve) (GSE42427) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens		 180,132
(45,033 x 4) 		4 by_platform
by_series
17 human placenta-derived cell line (JEG-3): Control vs. valproic acid(VPA)-treated (GSE41441) [Oligo Array] Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Feature Number version) (GPL1708) Eulji University 2012-10-10 Homo sapiens
Homo sapiens		 132,870
(44,290 x 3) 		3 by_platform
by_series
18 Gene alteration in A549 cells by disinfectant PHMG (GSE41156) [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version) (GPL10332) College of Medicine, Soonchunhyang University 2012-09-26 Homo sapiens
Homo sapiens		 45,220
(45,220 x 1) 		1 by_platform
by_series
19 The transcriptional landscape and mutational profile of lung adenocarcinoma (GSE40419) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) Genome Medicine Institute 2012-08-28 Homo sapiens
Homo sapiens		 164
(0 x 164) 		164 by_platform
by_series
20 Small RNA and mRNA profiles following TUT knock-down in HeLa (GSE40236) [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) Seoul National University 2012-08-20 Homo sapiens
Homo sapiens		 4
(0 x 4) 		4 by_platform
by_series
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