Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(811)		   Primates
(10)		   Rodents
(565)		   Mammals
(32)		   Vertebrates
(48)		   Invertebrates
(184)		   Plants
(227)		   Bacteria
(112)		   Viruses
(2)		   Phages
(0)		   Unclassified
(5)		   All
(2,003)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(339)		   Tiling Array
(22)		   cDNA Array
(43)		   Oligo Array
(184)		   Bead Array
(132)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(5)		   HT-Seq
(81)		   Other
(4)		   All
(811)		  
1   |   2   |   3   |   4   |   5      »      [41]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Effects of genome architecture and epigenetic factors on susceptibility of promoter CpG islands to aberrant DNA methylation induction. (GSE28284) [Oligo Array] Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Feature Number version) (GPL4126) National Cancer Center Research Institute 2011-03-31 Homo sapiens
Homo sapiens		 4,626,576
(243,504 x 19) 		4 9 6 by_platform
by_series
2 Whole genome expression array profiling highlights differences in mucosal defense genes in Barrett's esophagus and esophageal adenocarcinoma. (GSE28302) [Bead Array] Sentrix Human-6 Expression BeadChip (GPL2507) Queensland Institute of Medical Research 2011-03-31 Homo sapiens
Homo sapiens		 2,553,822
(47,293 x 54) 		54 by_platform
by_series
3 Microarray-based identification of age-dependent differences in gene expression of human dermal fibroblasts (GSE28300) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) LUMC 2011-03-31 Homo sapiens
Homo sapiens		 1,627,920
(45,220 x 36) 		36 by_platform
by_series
4 Effects of genome architecture and epigenetic factors on susceptibility of promoter CpG islands to aberrant DNA methylation induction. (GSE28284) [Oligo Array] Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Probe Name version) (GPL9767) National Cancer Center Research Institute 2011-03-31 Homo sapiens
Homo sapiens		 1,204,845
(240,969 x 5) 		3 2 by_platform
by_series
5 Transcription profiling of Rab25 transfected ovarian A2780 cancer cell (GSE28299) [GeneChip] [U133AAofAv2] Affymetrix GeneChip HT-HG_U133A Early Access Array (GPL4685) UT-MD Anderson Cancer Center 2011-03-31 Homo sapiens
Homo sapiens		 550,656
(22,944 x 24) 		8 16 by_platform
by_series
6 Effects of genome architecture and epigenetic factors on susceptibility of promoter CpG islands to aberrant DNA methylation induction. (GSE28284) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) National Cancer Center Research Institute 2011-03-31 Homo sapiens
Homo sapiens		 109,350
(54,675 x 2) 		1 1 by_platform
by_series
7 Genome-wide analysis of transcription factor E2F1 mutant proteins reveals that N- and C-terminal protein interaction domains do not participate in targeting E2F1 to the human genome. (GSE28286) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) Stanford University 2011-03-31 Homo sapiens
Homo sapiens		 9
(0 x 9) 		9 by_platform
by_series
8 An East-Asian polymorphism underlies BCR-ABL mutation-independent resistance to tyrosine kinase inhibitors in chronic myelogenous leukemia (GSE28303) [HT Sequencing] AB SOLiD System 2.0 (Homo sapiens) (GPL9138) Genome Institute of Singapore 2011-03-31 Homo sapiens
Homo sapiens		 5
(0 x 5) 		5 by_platform
by_series
9 An East-Asian polymorphism underlies BCR-ABL mutation-independent resistance to tyrosine kinase inhibitors in chronic myelogenous leukemia (GSE28303) [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) Genome Institute of Singapore 2011-03-31 Homo sapiens
Homo sapiens		 1
(0 x 1) 		1 by_platform
by_series
10 Isocitrate dehydrogenase 1 (IDH1) mutant gliomas demonstrate a distinct global CpG island methylation profile compared to IDH1 wildtype gliomas using MRSE (GSE28271) [Oligo Array] Agilent 45K CpG Island microarrays (GPL13349) UCLA 2011-03-30 Homo sapiens
Homo sapiens		 1,803,760
(45,094 x 40) 		40 by_platform
by_series
11 Genome-wide analysis of Prokineticin-1-regulated genes in human term myometrium (GSE28272) [Bead Array] Illumina HumanHT-12 V3.0 expression beadchip (GPL6947) MRC Human Reproductive Sciences Unit 2011-03-30 Homo sapiens
Homo sapiens		 1,171,272
(48,803 x 24) 		24 by_platform
by_series
12 Real-time Monitoring of Cisplatin Toxicity on Cancer Cells (GSE28274) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) University Heidelberg 2011-03-30 Homo sapiens
Homo sapiens		 328,050
(54,675 x 6) 		6 by_platform
by_series
13 Expression data from BJ-hTERT cells expressing vector, Cyclin E, c-Myc or coexpression of both (GSE28266) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) The Hebrew University of Jerusalem 2011-03-30 Homo sapiens
Homo sapiens		 233,079
(33,297 x 7) 		1 6 by_platform
by_series
14 Loss of cytoplasmic CDK1 predicts poor survival in human lung cancer and confers chemotherapeutic resistance (GSE28282) [cDNA Array] NHGRI Human 30k cDNA array (GPL13354) NCI 2011-03-30 Homo sapiens
Homo sapiens		 80,835
(26,945 x 3) 		3 by_platform
by_series
15 Differential expression of microRNA expression in tamoxifen-sensitive MCF-7 versus tamoxifen-resistant LY2 human breast cancer cells (GSE28267) [Oligo Array] miRCURY LNA microRNA Array, v.11.0 - hsa, mmu & rno (GPL7723) University of Louisville School of Medicine 2011-03-30 Homo sapiens
Homo sapiens		 28,042
(2,003 x 14) 		14 by_platform
by_series
16 Renal cortex microRNA expression differences between hypertensive and normotensive patients (GSE28283) [Oligo Array] Agilent-021827 Human miRNA Microarray (V3) (miRBase release 12.0 miRNA ID version) (GPL10850) University of Sydney 2011-03-30 Homo sapiens
Homo sapiens		 7,832
(979 x 8) 		8 by_platform
by_series
17 Differential expression of microRNA expression in tamoxifen-sensitive MCF-7 versus tamoxifen-resistant LY2 human breast cancer cells (GSE28267) [Oligo Array] miRCURY LNA microRNA Array, v.10.0 - hsa, mmu & rno (GPL7722) University of Louisville School of Medicine 2011-03-30 Homo sapiens
Homo sapiens		 7,674
(1,279 x 6) 		6 by_platform
by_series
18 NKX3-1, a Novel Transcriptional Factor of AR, Promotes Prostate Cancer Cell Survival via RAB3B GTPase-mediated protein trafficking (GSE28264) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) Genome Institute of Singapore (GIS) 2011-03-30 Homo sapiens
Homo sapiens		 9
(0 x 9) 		9 by_platform
by_series
19 Human medulloblastoma samples (GSE28245) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version) (GPL6480) German Cancer Research Center 2011-03-29 Homo sapiens
Homo sapiens		 2,630,016
(41,094 x 64) 		64 by_platform
by_series
20 Peripheral blood lymphocytes: ALS patients vs. healthy controls (GSE28253) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Carolinas Medical Center 2011-03-29 Homo sapiens
Homo sapiens		 994,840
(45,220 x 22) 		22 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [41]
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