Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(77)		   SAGE RsaI
(0)		   SAGE Sau3A
(5)		   MPSS
(2)		   GeneChip
(7,084)		   Tiling Array
(1,340)		   cDNA Array
(1,898)		   Oligo Array
(4,140)		   Bead Array
(1,936)		   Protein Array
(0)		   Antibody
(34)		   RT-PCR
(126)		   HT-Seq
(1,163)		   Other
(79)		   All
(17,885)		  
1   |   2   |   3   |   4   |   5      »      [895]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 [miRNA Validation Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy (GSE26247) [Bead Array] Illumina Custom Prostate Cancer DASL Panel miRNA (GPL11350) Emory University 2010-12-21 Homo sapiens
Homo sapiens		 109,920
(1,145 x 96) 		93 3 by_platform
by_series
2 [miRNA Training Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy (GSE26245) [Bead Array] Illumina Custom Prostate Cancer DASL Panel miRNA (GPL11350) Emory University 2010-12-21 Homo sapiens
Homo sapiens		 109,920
(1,145 x 96) 		91 5 by_platform
by_series
3 [Gene Expression Validation Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy (GSE26242) [Bead Array] Illumina Custom Prostate Cancer DASL Panel 1.5K expression beadchip (GPL11309) Emory University 2010-12-21 Homo sapiens
Homo sapiens		 147,456
(1,536 x 96) 		90 6 by_platform
by_series
4 [Gene Expression Training Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy (GSE26022) [Bead Array] Illumina Custom Prostate Cancer DASL Panel 1.5K expression beadchip (GPL11309) Emory University 2010-12-11 Homo sapiens
Homo sapiens		 294,912
(1,536 x 192) 		185 7 by_platform
by_series
5 [E-TABM-828] ChIP-Seq in human MCF7 and HEPG2 cells (GSE25021) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) European Bioinformatics Institute 2010-10-29 Homo sapiens
Homo sapiens		 32
(0 x 32) 		10 20 2 by_platform
by_series
6 [E-TABM-722] Transcription factor binding evolution in five vertebrates (GSE22078) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) European Bioinformatics Institute 2010-06-01 Homo sapiens
Homo sapiens		 11
(0 x 11) 		11 by_platform
by_series
7 [E-TABM-482] DNA methylome of human spermatozoa (GSE25686) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) European Bioinformatics Institute 2010-11-29 Homo sapiens
Homo sapiens		 1
(0 x 1) 		1 by_platform
by_series
8 [E-MTAB-935] GENCODE PCR-Seq Batch VII (GSE37592) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) European Bioinformatics Institute 2012-04-25 Homo sapiens
Homo sapiens		 8
(0 x 8) 		1 1 1 2 1 1 1 by_platform
by_series
9 [E-MTAB-831] GENCODE PCR-Seq Batch VI (GSE34821) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2012-01-03 Homo sapiens
Homo sapiens		 8
(0 x 8) 		1 1 1 2 1 1 1 by_platform
by_series
10 [E-MTAB-737] GENCODE PCR-Seq Batch V (GSE34820) [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) European Bioinformatics Institute 2012-01-03 Homo sapiens
Homo sapiens		 8
(0 x 8) 		1 1 1 2 1 1 1 by_platform
by_series
11 [E-MTAB-684] GENCODE PCR-Seq Batch IV (GSE34797) [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) European Bioinformatics Institute 2011-12-30 Homo sapiens
Homo sapiens		 20
(0 x 20) 		3 2 4 4 2 3 2 by_platform
by_series
12 [E-MTAB-612] GENCODE PCR-Seq Batch I (GSE30619) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2011-07-12 Homo sapiens
Homo sapiens		 7
(0 x 7) 		1 1 1 2 1 1 by_platform
by_series
13 [E-MTAB-533] GENCODE Targeted Sequencing Batch III (GSE30612) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2011-07-12 Homo sapiens
Homo sapiens		 1
(0 x 1) 		1 by_platform
by_series
14 [E-MTAB-513] Illumina Human Body Map 2.0 Project (GSE30611) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) European Bioinformatics Institute 2011-07-12 Homo sapiens
Homo sapiens		 48
(0 x 48) 		2 4 2 6 4 2 2 2 2 6 16 by_platform
by_series
15 [E-MTAB-407] GENCODE PCR-Seq Batch II (GSE25711) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2010-11-30 Homo sapiens
Homo sapiens		 8
(0 x 8) 		1 1 1 2 1 1 1 by_platform
by_series
16 [E-MTAB-345] ChIP-Seq of human MCF-7 cells with anti-ERalpha following estrogen treatment (GSE25769) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2010-12-01 Homo sapiens
Homo sapiens		 8
(0 x 8) 		8 by_platform
by_series
17 [E-MTAB-341] Individual-nucleotide resolution CLIP using high throughput sequencing of human HeLa cells to enable precise mapping of protein-RNA interactions in intact cells (GSE25681) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2010-11-29 Homo sapiens
Homo sapiens		 1
(0 x 1) 		1 by_platform
by_series
18 [E-MTAB-305] ncRNA expression, including snoRNAs, across 11 tissues using polyA-neutral amplification (GSE25028) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2010-10-29 Homo sapiens
Homo sapiens		 11
(0 x 11) 		1 1 1 2 2 1 1 1 1 by_platform
by_series
19 [E-MTAB-223] ChIP-seq for FOXA1, ER and CTCF in breast cancer cell lines (GSE25710) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) European Bioinformatics Institute 2010-11-30 Homo sapiens
Homo sapiens		 51
(0 x 51) 		51 by_platform
by_series
20 [E-MTAB-223] ChIP-seq for FOXA1, ER and CTCF in breast cancer cell lines (GSE25710) [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) European Bioinformatics Institute 2010-11-30 Homo sapiens
Homo sapiens		 2
(0 x 2) 		2 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [895]
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