Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,010)		   Primates
(80)		   Rodents
(7,471)		   Mammals
(298)		   Vertebrates
(469)		   Invertebrates
(565)		   Plants
(5,482)		   Bacteria
(1,328)		   Viruses
(9)		   Phages
(0)		   Unclassified
(100)		   All
(32,812)		  
  SAGE NlaIII
(17)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(8,670)		   Tiling Array
(196)		   cDNA Array
(1,336)		   Oligo Array
(6,335)		   Bead Array
(377)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(23)		   HT-Seq
(46)		   Other
(10)		   All
(17,010)		  
  brain
(1,285)		   blood
(3,113)		   connective
(868)		   reproductive
(869)		   muscular
(143)		   digestive
(1,696)		   liver
(1,004)		   lung
(1,276)		   urinary
(226)		   endo/exo-crine
(891)		   embryo
(419)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(322)		   unclassified
(4,898)		   all
(17,010)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1018961 TNF00min_head 0 LSBM, RCAST 2012-10-12 [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) SRA Homo sapiens
Homo sapiens		 cerebrum TNF00min_head
2 GSM1018962 TNF00min_tail 0 LSBM, RCAST 2012-10-12 [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) SRA Homo sapiens
Homo sapiens		 unclassified source_name:TNF00min title:TNF00min_tail description:0 min after TNF alpha addition
3 GSM1018963 TNF30min_head 0 LSBM, RCAST 2012-10-12 [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) SRA Homo sapiens
Homo sapiens		 cerebrum TNF30min_head
4 GSM1018964 TNF30min_tail 0 LSBM, RCAST 2012-10-12 [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) SRA Homo sapiens
Homo sapiens		 unclassified source_name:TNF30min title:TNF30min_tail description:30 min after TNF alpha addition
5 GSM315865 Bcell hScc1-1 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 1of7 (NCBI Build 36) (GPL7222) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from healthy human Bcell INPUT DNA from healthy human Bcell
6 GSM315866 Bcell hScc1-2 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 2of7 (NCBI Build 36) (GPL7223) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from healthy human Bcell INPUT DNA from healthy human Bcell
7 GSM315867 Bcell hScc1-3 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 3of7 (NCBI Build 36) (GPL7224) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from healthy human Bcell INPUT DNA from healthy human Bcell
8 GSM315868 Bcell hScc1-4 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 4of7 (NCBI Build 36) (GPL7225) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from healthy human Bcell INPUT DNA from healthy human Bcell
9 GSM315869 Bcell hScc1-5 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 5of7 (NCBI Build 36) (GPL7226) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from healthy human Bcell INPUT DNA from healthy human Bcell
10 GSM315870 Bcell hScc1-6 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 6of7 (NCBI Build 36) (GPL7227) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from healthy human Bcell INPUT DNA from healthy human Bcell
11 GSM315871 Bcell hScc1-7 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 7of7 (NCBI Build 36) (GPL7228) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from healthy human Bcell INPUT DNA from healthy human Bcell
12 GSM315872 CdLsBcell hScc1-1 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 1of7 (NCBI Build 36) (GPL7222) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from CdLs patient Bcell INPUT DNA from CdLs patient Bcell
13 GSM315873 CdLsBcell hScc1-2 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 2of7 (NCBI Build 36) (GPL7223) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from CdLs patient Bcell INPUT DNA from CdLs patient Bcell
14 GSM315874 CdLsBcell hScc1-3 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 3of7 (NCBI Build 36) (GPL7224) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from CdLs patient Bcell INPUT DNA from CdLs patient Bcell
15 GSM315875 CdLsBcell hScc1-4 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 4of7 (NCBI Build 36) (GPL7225) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from CdLs patient Bcell INPUT DNA from CdLs patient Bcell
16 GSM315876 CdLsBcell hScc1-5 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 5of7 (NCBI Build 36) (GPL7226) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from CdLs patient Bcell INPUT DNA from CdLs patient Bcell
17 GSM315877 CdLsBcell hScc1-6 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 6of7 (NCBI Build 36) (GPL7227) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from CdLs patient Bcell INPUT DNA from CdLs patient Bcell
18 GSM315878 CdLsBcell hScc1-7 0 The University of Tokyo 2008-08-28 [Tiling Array] Affymetrix GeneChip Human Tiling 2.0R Array Set_Array 7of7 (NCBI Build 36) (GPL7228) genomic Homo sapiens
Homo sapiens		 lymphnode hScc1ChIP DNA from CdLs patient Bcell INPUT DNA from CdLs patient Bcell
19 GSM364911 HCT116_MeDIP_1 0 The University of Tokyo 2009-01-27 [GeneChip] [Hs_PromPR] Affymetrix Human Promoter 1.0R Array (GPL5082) genomic Homo sapiens
Homo sapiens		 colon Colon cancer cell line
20 GSM364912 HCT116_MeDIP_2 0 The University of Tokyo 2009-01-27 [GeneChip] [Hs_PromPR] Affymetrix Human Promoter 1.0R Array (GPL5082) genomic Homo sapiens
Homo sapiens		 colon Colon cancer cell line
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