Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(756)		   SAGE RsaI
(0)		   SAGE Sau3A
(15)		   MPSS
(35)		   GeneChip
(234,596)		   Tiling Array
(9,457)		   cDNA Array
(39,248)		   Oligo Array
(103,669)		   Bead Array
(90,658)		   Protein Array
(0)		   Antibody
(1,130)		   RT-PCR
(2,916)		   HT-Seq
(13,834)		   Other
(6,106)		   All
(502,421)		  
  brain
(29,005)		   blood
(139,913)		   connective
(34,648)		   reproductive
(27,518)		   muscular
(8,601)		   digestive
(23,268)		   liver
(16,439)		   lung
(20,411)		   urinary
(13,086)		   endo/exo-crine
(48,364)		   embryo
(3,899)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(31,732)		   unclassified
(105,537)		   all
(502,421)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM252783 DNAse treated CD4+ T-cells on Solexa 14,814,587 National Cancer Institute 2007-12-21 [HT Sequencing] NCI Human Solexa Platform 14814K (GPL6314) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ T-cells, DNAse Treated
2 GSM301562 HEK Input DNA rep1 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Input DNA title:HEK Input DNA rep1 description:raw sequence 070710_4
3 GSM301564 HEK Input DNA rep2 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Input DNA title:HEK Input DNA rep2 description:raw sequence 070929_5
4 GSM301565 HEK Input DNA rep3 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Input DNA title:HEK Input DNA rep3 description:raw sequence 070929_6
5 GSM301566 HEK ChIP DNA rep1 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Polymerase II ChIP DNA title:HEK ChIP DNA rep1 description:raw sequence 070824_2
6 GSM301567 HEK ChIP DNA rep2 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Polymerase II ChIP DNA title:HEK ChIP DNA rep2 description:raw sequence 070929_4
7 GSM301568 HEK293T cells rep1 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 kidney Human embryonic kidney cells
8 GSM301581 HEK293T cells rep2 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 kidney Human embryonic kidney cells
9 GSM301582 B cells rep1 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 lymphnode Ramos lymphoma B cells
10 GSM301583 B cells rep2 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 lymphnode Ramos lymphoma B cells
11 GSM652439 human_T12_RNA-seq 6,293,859 Mount Sinai School of Medicine 2011-01-10 [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) SRA Homo sapiens
Homo sapiens		 thyroid/parathyroid primary thyroid cell line, IFN-alpha, 12 hrs
12 GSM282334 NA10846_CN2 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA10846_CN2 description:Hapmap sample NA10846 was hybridized to Nsp CN arrays
13 GSM282335 NA12144_CN2 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA12144_CN2 description:Hapmap sample NA12144 was hybridized to Nsp CN arrays
14 GSM282336 NA12145_CN2 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA12145_CN2 description:Hapmap sample NA12145 was hybridized to Nsp CN arrays
15 GSM282337 NA10831_CN2 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA10831_CN2 description:Hapmap sample NA10831 was hybridized to Nsp CN arrays
16 GSM282338 NA12155_CN2 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA12155_CN2 description:Hapmap sample NA12155 was hybridized to Nsp CN arrays
17 GSM282339 NA12156_CN2 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA12156_CN2 description:Hapmap sample NA12156 was hybridized to Nsp CN arrays
18 GSM282340 NA10851_Nsp_CN2_rep1 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA10851_Nsp_CN2_rep1 description:Sample NA10851 was hybridized to Nsp CN arrays in triplicates
19 GSM282341 NA15510_Nsp_CN2_rep1 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA15510_Nsp_CN2_rep1 description:Sample NA15510 was hybridized to Nsp CN arrays in triplicates
20 GSM282342 NA01416_Nsp_CN2_rep1 6,276,448 Affymetrix, Inc 2008-04-17 [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) genomic Homo sapiens
Homo sapiens		 unclassified source_name:DNA was obtained from NIGHS Human Genetic Cell Repository title:NA01416_Nsp_CN2_rep1 description:Sample NA01416 was hybridized to Nsp CN arrays in triplicates
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