Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(4,712)		   Primates
(41)		   Rodents
(1,963)		   Mammals
(85)		   Vertebrates
(71)		   Invertebrates
(162)		   Plants
(837)		   Bacteria
(313)		   Viruses
(0)		   Phages
(18)		   Unclassified
(320)		   All
(8,522)		  
  SAGE NlaIII
(11)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(2,361)		   Tiling Array
(236)		   cDNA Array
(1,235)		   Oligo Array
(547)		   Bead Array
(322)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(4,712)		  
  brain
(128)		   blood
(1,305)		   connective
(611)		   reproductive
(249)		   muscular
(203)		   digestive
(628)		   liver
(23)		   lung
(182)		   urinary
(150)		   endo/exo-crine
(713)		   embryo
(6)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(115)		   unclassified
(399)		   all
(4,712)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM52933 Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 0 hours
2 GSM52934 Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 2 hours
3 GSM52935 Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 8 hours
4 GSM52936 Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow Brg1 ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 32 hours
5 GSM52937 CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 0 hours
6 GSM52938 CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 2 hours
7 GSM52939 CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 8 hours
8 GSM52940 CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CEBPe ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 32 hours
9 GSM52941 CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 0 hours
10 GSM52948 CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 2 hours
11 GSM52955 CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 8 hours
12 GSM52956 CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow CTCF ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 32 hours
13 GSM52957 H3K27T ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow H3K27TMe ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 0 hours
14 GSM52958 H3K27T ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow H3K27TMe ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 2 hours
15 GSM52959 H3K27T ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow H3K27TMe ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 8 hours
16 GSM52960 H3K27T ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 bone marrow H3K27TMe ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 32 hours
17 GSM52961 HisH4 ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 pooled H4-TetAc ChIP from Retinoic Acid Stimulated HL60 Cells, 0 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 0 hours
18 GSM52962 HisH4 ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 pooled H4-TetAc ChIP from Retinoic Acid Stimulated HL60 Cells, 2 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 2 hours
19 GSM52963 HisH4 ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 pooled H4-TetAc ChIP from Retinoic Acid Stimulated HL60 Cells, 8 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 8 hours
20 GSM52964 HisH4 ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours (NCBIv34) 737,680 Affymetrix, Inc. 2005-06-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) genomic Homo sapiens
Homo sapiens		 pooled H4-TetAc ChIP from Retinoic Acid Stimulated HL60 Cells, 32 hours Whole Cell Extract (WCE) DNA from Retinoic Acid Stimulated HL60 Cells, 32 hours
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