Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(11,237)		   Primates
(55)		   Rodents
(3,938)		   Mammals
(293)		   Vertebrates
(491)		   Invertebrates
(722)		   Plants
(2,487)		   Bacteria
(1,010)		   Viruses
(0)		   Phages
(0)		   Unclassified
(83)		   All
(20,316)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(7,919)		   Tiling Array
(135)		   cDNA Array
(1,175)		   Oligo Array
(1,682)		   Bead Array
(279)		   Protein Array
(0)		   Antibody
(44)		   RT-PCR
(0)		   HT-Seq
(2)		   Other
(0)		   All
(11,237)		  
  brain
(677)		   blood
(2,768)		   connective
(509)		   reproductive
(705)		   muscular
(239)		   digestive
(231)		   liver
(745)		   lung
(326)		   urinary
(119)		   endo/exo-crine
(726)		   embryo
(63)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(2,054)		   unclassified
(2,075)		   all
(11,237)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM252783 DNAse treated CD4+ T-cells on Solexa 14,814,587 National Cancer Institute 2007-12-21 [HT Sequencing] NCI Human Solexa Platform 14814K (GPL6314) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ T-cells, DNAse Treated
2 GSM243197 hScc1 localization in G2 (Whole Genome #8) 3,138,510 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36 (GPL6138) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #8) description:hScc1 distribution in G2 phase. Array 8 of 14.
3 GSM243242 CTCF localization in G2 (Whole Genome #8) 3,138,510 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36 (GPL6138) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #8) description:CTCF distribution in G2 phase. Array 8 of 14. For WCE fraction, the same file as we used for the analysis of hScc1 distribution were used.
4 GSM243198 hScc1 localization in G2 (Whole Genome #9) 3,101,522 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36 (GPL6139) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #9) description:hScc1 distribution in G2 phase. Array 9 of 14.
5 GSM243241 CTCF localization in G2 (Whole Genome #9) 3,101,522 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36 (GPL6139) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #9) description:CTCF distribution in G2 phase. Array 9 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
6 GSM243190 hScc1 localization in G2 (Whole Genome #1) 3,095,969 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (1) - NCBI build 36 (GPL6131) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #1) description:hScc1 distribution in G2 phase. Array 1 of 14.
7 GSM243234 CTCF localization in G2 (Whole Genome #1) 3,095,969 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (1) - NCBI build 36 (GPL6131) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #1) description:CTCF distribution in G2 phase. Array 1 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
8 GSM243195 hScc1 localization in G2 (Whole Genome #6) 3,095,856 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (6) - NCBI build 36 (GPL6136) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #6) description:hScc1 distribution in G2 phase. Array 6 of 14.
9 GSM243239 CTCF localization in G2 (Whole Genome #6) 3,095,856 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (6) - NCBI build 36 (GPL6136) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #6) description:CTCF distribution in G2 phase. Array 6 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
10 GSM243192 hScc1 localization in G2 (Whole Genome #3) 3,095,816 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (3) - NCBI build 36 (GPL6133) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #3) description:hScc1 distribution in G2 phase. Array 3 of 14.
11 GSM243236 CTCF localization in G2 (Whole Genome #3) 3,095,816 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (3) - NCBI build 36 (GPL6133) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #3) description:CTCF distribution in G2 phase. Array 3 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
12 GSM243193 hScc1 localization in G2 (Whole Genome #4) 3,095,657 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (4) - NCBI build 36 (GPL6134) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #4) description:hScc1 distribution in G2 phase. Array 4 of 14.
13 GSM243237 CTCF localization in G2 (Whole Genome #4) 3,095,657 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (4) - NCBI build 36 (GPL6134) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #4) description:CTCF distribution in G2 phase. Array 4 of 14. For WCE fraction, the same file as we used for the analysis of hScc1 distribution were used.
14 GSM243200 hScc1 localization in G2 (Whole Genome #11) 3,095,630 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (11) - NCBI build 36 (GPL6141) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #11) description:hScc1 distribution in G2 phase. Array 11 of 14.
15 GSM243244 CTCF localization in G2 (Whole Genome #11) 3,095,630 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (11) - NCBI build 36 (GPL6141) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #11) description:CTCF distribution in G2 phase. Array 11 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
16 GSM243199 hScc1 localization in G2 (Whole Genome #10) 3,094,524 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (10) - NCBI build 36 (GPL6140) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #10) description:hScc1 distribution in G2 phase. Array 10 of 14.
17 GSM243243 CTCF localization in G2 (Whole Genome #10) 3,094,524 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (10) - NCBI build 36 (GPL6140) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #10) description:CTCF distribution in G2 phase. Array 10 of 14. For WCE fraction, the same file as we used for the analysis of hScc1 distribution were used.
18 GSM243191 hScc1 localization in G2 (Whole Genome #2) 3,093,917 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (2) - NCBI build 36 (GPL6132) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #2) description:hScc1 distribution in G2 phase. Array 2 of 14.
19 GSM243235 CTCF localization in G2 (Whole Genome #2) 3,093,917 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (2) - NCBI build 36 (GPL6132) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #2) description:CTCF distribution in G2 phase. Array 2 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
20 GSM243194 hScc1 localization in G2 (Whole Genome #5) 3,093,523 The University of Tokyo 2007-11-15 [Tiling Array] GeneChip Human Tiling 1.0R Array set (5) - NCBI build 36 (GPL6135) genomic Homo sapiens
Homo sapiens		 unclassified source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #5) description:hScc1 distribution in G2 phase. Array 5 of 14.
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