Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(14,410)
  Primates
(143)
  Rodents
(2,709)
  Mammals
(1,046)
  Vertebrates
(348)
  Invertebrates
(428)
  Plants
(2,170)
  Bacteria
(357)
  Viruses
(0)
  Phages
(0)
  Unclassified
(40)
  All
(21,651)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(5,461)
  Tiling Array
(4)
  cDNA Array
(1,699)
  Oligo Array
(2,893)
  Bead Array
(3,855)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(372)
  HT-Seq
(105)
  Other
(21)
  All
(14,410)
 
  brain
(624)
  blood
(5,534)
  connective
(733)
  reproductive
(449)
  muscular
(123)
  digestive
(1,027)
  liver
(326)
  lung
(722)
  urinary
(147)
  endo/exo-crine
(774)
  embryo
(162)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(505)
  unclassified
(3,284)
  all
(14,410)
 
1   |   2   |   3   |   4   |   5      »      [721]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM547847 Z138_AZA+TSA 54,675 IDIBAPS 2010-05-28 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
unclassified source_name:AZA+TSA treatment title:Z138_AZA+TSA
2 GSM547846 Z138_AZA 54,675 IDIBAPS 2010-05-28 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
unclassified source_name:AZA treatment title:Z138_AZA
3 GSM629503 Z138_2_sensitive 54,675 Center for Applied Medical Research (Cima) 2010-11-24 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
lymphnode Mantel cell lymphoma cell line, sensitive to ABT-737
4 GSM629502 Z138_1_sensitive 54,675 Center for Applied Medical Research (Cima) 2010-11-24 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
lymphnode Mantel cell lymphoma cell line, sensitive to ABT-737
5 GSM219455 Z138/rep2 31,145 CNIO 2007-08-21 [Oligo Array] Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Feature Number version) (GPL1708) RNA Homo sapiens
Homo sapiens
lymphnode MCL1 over-expressing Z-138 B-cells Empty vector/Z-138 B-cells
6 GSM219454 Z138/rep1 31,145 CNIO 2007-08-21 [Oligo Array] Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Feature Number version) (GPL1708) RNA Homo sapiens
Homo sapiens
lymphnode MCL1 over-expressing Z-138 B-cells Empty vector/Z-138 B-cells
7 GSM854805 Z138-shSOX11.3 54,675 IDIBAPS 2011-12-28 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
unclassified source_name:Z138-shSOX11 title:Z138-shSOX11.3
8 GSM854804 Z138-shSOX11.1 54,675 IDIBAPS 2011-12-28 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
unclassified source_name:Z138-shSOX11 title:Z138-shSOX11.1
9 GSM854803 Z138-shControl.2 54,675 IDIBAPS 2011-12-28 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
unclassified source_name:Z138-shControl title:Z138-shControl.2
10 GSM854802 Z138-shControl.1 54,675 IDIBAPS 2011-12-28 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
unclassified source_name:Z138-shControl title:Z138-shControl.1
11 GSM547845 Z138 54,675 IDIBAPS 2010-05-28 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
unclassified source_name:mock treated title:Z138
12 GSM654284 Y306666 9,216 qGenomics 2011-01-12 [cDNA Array] qChipPre BAC Version (GPL11395) genomic Homo sapiens
Homo sapiens
unclassified source_name:Total DNA from sample Y306666 labeled with Cyanine-5 (red). Total DNA from reference sample 20M labeled with Cyanine-3 (green). title:Y306666 description:biological sample used as control/testing purposes in the study.
13 GSM653393 X964572.1 9,216 qGenomics 2011-01-12 [cDNA Array] qChipPre BAC Version (GPL11395) genomic Homo sapiens
Homo sapiens
unclassified source_name:Total DNA from sample X964572.1 labeled with Cyanine-5 (red). Total DNA from reference sample 20M labeled with Cyanine-3 (green). title:X964572.1 description:biological sample used as control/testing purposes in the study.
14 GSM948582 X78- 54,675 IDIBAPS 2012-06-14 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
colon Human colon biopsies from UC patient with active disease (non-involved mucosa)
15 GSM948580 X66- 54,675 IDIBAPS 2012-06-14 [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) RNA Homo sapiens
Homo sapiens
colon Human colon biopsies from UC patient with active disease (non-involved mucosa)
16 GSM862919 WT12 Control WT12 45,015 IDIBELL 2012-01-18 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
unclassified source_name:H1299-BRG1-WT title:WT12 Control WT12 description:12 hours
17 GSM769904 WT technical replicate 4 45,220 Institute for Research in Biomedicine (IRB, Barcelona) 2011-08-01 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
skin Primary human keratinocytes
18 GSM769903 WT technical replicate 3 45,220 Institute for Research in Biomedicine (IRB, Barcelona) 2011-08-01 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
skin Primary human keratinocytes
19 GSM769902 WT technical replicate 2 45,220 Institute for Research in Biomedicine (IRB, Barcelona) 2011-08-01 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
skin Primary human keratinocytes
20 GSM769919 WT technical replicate 2 45,220 Institute for Research in Biomedicine (IRB, Barcelona) 2011-08-01 [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version) (GPL10332) RNA Homo sapiens
Homo sapiens
skin Primary human keratinocytes
1   |   2   |   3   |   4   |   5      »      [721]