Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(16,283)

Primates
(80)

Rodents
(6,896)

Mammals
(0)

Vertebrates
(0)

Invertebrates
(0)

Plants
(0)

Bacteria
(0)

Phages
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(8,212)

Tiling Array
(0)

cDNA Array
(0)

Oligo Array
(6,079)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(17)

HT-Seq
(0)

Other
(10)

All
(16,283)

brain
(0)

blood
(0)

connective
(0)

reproductive
(0)

muscular
(0)

digestive
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(0)

unclassified
(4,644)

all
(16,283)

1 | 2 | 3 | 4 | 5 » [233]

	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM298710	SMAD2/3 localization in TGF-beta-treated HaCaT cells	5,111,669	University of Tokyo	2008-06-17	[GeneChip] Human Promoter Array 1.0R - NCBI build_35 (GPL7026)	genomic	Homo sapiens	unclassified	source_name:Smad2_3_ChIP_DNA Input_DNA title:SMAD2/3 localization in TGF-beta-treated HaCaT cells description:HaCaT cells treated with TGF-beta3 were used for Smad2/3 ChIP. Sheared input genomic DNA was used for control. Both Smad2/3 ChIP and input samples were prepared as biological duplicate.
2	GSM243197	hScc1 localization in G2 (Whole Genome #8)	3,138,510	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36 (GPL6138)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #8) description:hScc1 distribution in G2 phase. Array 8 of 14.
3	GSM243242	CTCF localization in G2 (Whole Genome #8)	3,138,510	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36 (GPL6138)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #8) description:CTCF distribution in G2 phase. Array 8 of 14. For WCE fraction, the same file as we used for the analysis of hScc1 distribution were used.
4	GSM243198	hScc1 localization in G2 (Whole Genome #9)	3,101,522	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36 (GPL6139)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #9) description:hScc1 distribution in G2 phase. Array 9 of 14.
5	GSM243241	CTCF localization in G2 (Whole Genome #9)	3,101,522	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36 (GPL6139)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #9) description:CTCF distribution in G2 phase. Array 9 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
6	GSM243190	hScc1 localization in G2 (Whole Genome #1)	3,095,969	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (1) - NCBI build 36 (GPL6131)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #1) description:hScc1 distribution in G2 phase. Array 1 of 14.
7	GSM243234	CTCF localization in G2 (Whole Genome #1)	3,095,969	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (1) - NCBI build 36 (GPL6131)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #1) description:CTCF distribution in G2 phase. Array 1 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
8	GSM243195	hScc1 localization in G2 (Whole Genome #6)	3,095,856	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (6) - NCBI build 36 (GPL6136)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #6) description:hScc1 distribution in G2 phase. Array 6 of 14.
9	GSM243239	CTCF localization in G2 (Whole Genome #6)	3,095,856	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (6) - NCBI build 36 (GPL6136)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #6) description:CTCF distribution in G2 phase. Array 6 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
10	GSM243192	hScc1 localization in G2 (Whole Genome #3)	3,095,816	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (3) - NCBI build 36 (GPL6133)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #3) description:hScc1 distribution in G2 phase. Array 3 of 14.
11	GSM243236	CTCF localization in G2 (Whole Genome #3)	3,095,816	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (3) - NCBI build 36 (GPL6133)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #3) description:CTCF distribution in G2 phase. Array 3 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
12	GSM243193	hScc1 localization in G2 (Whole Genome #4)	3,095,657	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (4) - NCBI build 36 (GPL6134)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #4) description:hScc1 distribution in G2 phase. Array 4 of 14.
13	GSM243237	CTCF localization in G2 (Whole Genome #4)	3,095,657	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (4) - NCBI build 36 (GPL6134)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #4) description:CTCF distribution in G2 phase. Array 4 of 14. For WCE fraction, the same file as we used for the analysis of hScc1 distribution were used.
14	GSM243200	hScc1 localization in G2 (Whole Genome #11)	3,095,630	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (11) - NCBI build 36 (GPL6141)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #11) description:hScc1 distribution in G2 phase. Array 11 of 14.
15	GSM243244	CTCF localization in G2 (Whole Genome #11)	3,095,630	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (11) - NCBI build 36 (GPL6141)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #11) description:CTCF distribution in G2 phase. Array 11 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
16	GSM243199	hScc1 localization in G2 (Whole Genome #10)	3,094,524	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (10) - NCBI build 36 (GPL6140)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #10) description:hScc1 distribution in G2 phase. Array 10 of 14.
17	GSM243243	CTCF localization in G2 (Whole Genome #10)	3,094,524	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (10) - NCBI build 36 (GPL6140)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #10) description:CTCF distribution in G2 phase. Array 10 of 14. For WCE fraction, the same file as we used for the analysis of hScc1 distribution were used.
18	GSM243191	hScc1 localization in G2 (Whole Genome #2)	3,093,917	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (2) - NCBI build 36 (GPL6132)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #2) description:hScc1 distribution in G2 phase. Array 2 of 14.
19	GSM243235	CTCF localization in G2 (Whole Genome #2)	3,093,917	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (2) - NCBI build 36 (GPL6132)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:CTCF localization in G2 (Whole Genome #2) description:CTCF distribution in G2 phase. Array 2 of 14. For WCE fraction, the same data as we used for the analyses of hScc1 were used.
20	GSM243194	hScc1 localization in G2 (Whole Genome #5)	3,093,523	The University of Tokyo	2007-11-15	[Tiling Array] GeneChip Human Tiling 1.0R Array set (5) - NCBI build 36 (GPL6135)	genomic	Homo sapiens	unclassified	source_name:Chromatin Immuno-precipitated DNA Whole cell extract (WCE) fraction used for the normalization of ChIP fraction. title:hScc1 localization in G2 (Whole Genome #5) description:hScc1 distribution in G2 phase. Array 5 of 14.

1 | 2 | 3 | 4 | 5 » [233]